DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and CG14669

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001262281.1 Gene:CG14669 / 40652 FlyBaseID:FBgn0037326 Length:306 Species:Drosophila melanogaster


Alignment Length:173 Identity:49/173 - (28%)
Similarity:82/173 - (47%) Gaps:19/173 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDS-YRKQVEVDGQQCMLE--ILDTAGTEQFTA 66
            |...||:.||||:::..||....|...:..|.... |:..:..|  .|:.|  :||....::|.|
  Fly    96 KAAFLGATGVGKTSILQQFFYHDFPRTHQTTTHRKIYKNCLVCD--TCIRELMVLDVPPQKRFPA 158

  Fly    67 MRDLYMKNG--------QGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCD-LEE 122
            .......||        ..:||||.:....||...:.:|:|||......|..:::||||.| :.|
  Fly   159 DNFAEWNNGHPLGLRTVHAYVLVYDMGNLETFQYCRSMRDQILDSFSHRDFSIIVVGNKFDNVTE 223

  Fly   123 ERVVGKELGKNLAT----QFNCAFMETSAKAKVNVNDIFYDLV 161
            .:...:|| |:::|    .:.|.::|.||:....:.|:|.:|:
  Fly   224 AQANSQEL-KDISTLVRKHWRCGYVECSAQYNYKIGDVFRELM 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 49/173 (28%)
CG14669NP_001262281.1 P-loop_NTPase 95..267 CDD:304359 49/173 (28%)
small_GTPase 96..265 CDD:197466 48/171 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453002
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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