DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rhebl1

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_988937.1 Gene:rhebl1 / 394534 XenbaseID:XB-GENE-493839 Length:184 Species:Xenopus tropicalis


Alignment Length:184 Identity:57/184 - (30%)
Similarity:104/184 - (56%) Gaps:4/184 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            ::..|||:||...||||:|.:||::..|.:.|:||||:::.|...:...:..|:::||||.::::
 Frog     4 VKHRKIVMLGYPSVGKSSLALQFIKGDFPKDYEPTIENTWSKTFVMGSDEFELDVVDTAGQDEYS 68

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEE-RVVGKE 129
            .:...::....|:::|||:....:|...:.:...::..:....:|:||||||.||... |.|..|
 Frog    69 LLPQSFIFGIHGYIVVYSVACSRSFQIARAIHSILVDRRGKCLMPIVLVGNKNDLPTHCREVKPE 133

  Fly   130 LGKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSPEKKQKKPKKSLCVL 183
            .||.||..:..||:|.|||.......||..::.:|::   .::....:|..||:
 Frog   134 DGKKLAESWGAAFLEVSAKDPERSKLIFTKMIEEIDR---VERSFGEEKKCCVM 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 53/162 (33%)
rhebl1NP_988937.1 RheB 6..184 CDD:206709 56/180 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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