DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rasd1

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_956826.1 Gene:rasd1 / 393504 ZFINID:ZDB-GENE-040426-1473 Length:265 Species:Danio rerio


Alignment Length:201 Identity:74/201 - (36%)
Similarity:112/201 - (55%) Gaps:26/201 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            |::|:|||..|||:|:..:|:...|.|:|.|||||.:||...:.|....|:||||:|...|.|||
Zfish    20 YRMVILGSTKVGKTAIVSRFLNGRFEEQYTPTIEDFHRKLYSIKGDVYQLDILDTSGNHPFPAMR 84

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL--------RVKDTDDVPMVLVGNKCDLEEERV 125
            .|.:..|..|:||:|:..:.:|:::|.|::||.        :.|:..|||:|:.|||.|.|..|.
Zfish    85 RLSILTGDVFILVFSLDNRESFHEVQRLKQQIYETKSCLKNKTKENVDVPLVICGNKGDREFYRE 149

  Fly   126 VGK-ELGKNLATQFNCAFMETSAKAKVNVNDIF---YDLVRQINKKSPE--------------KK 172
            |.: |:.:.:|....||:.|.|||...||:.:|   :.|.:..|:.||:              ||
Zfish   150 VQRDEIEQLIAGDEQCAYFEISAKRNTNVDQMFQRLFTLAKLPNEMSPDLHRKVSVQYCDILHKK 214

  Fly   173 QKKPKK 178
            ..|.||
Zfish   215 SLKNKK 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 66/172 (38%)
rasd1NP_956826.1 Rhes_like 20..265 CDD:133343 74/201 (37%)

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