DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and CG8519

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_648054.2 Gene:CG8519 / 38745 FlyBaseID:FBgn0035711 Length:207 Species:Drosophila melanogaster


Alignment Length:183 Identity:59/183 - (32%)
Similarity:100/183 - (54%) Gaps:9/183 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTA--GTEQ 63
            :.|.||.|:|:..||||||.|:|:...::.:||...|:.|:.:..|||:..:.|||||.  ..::
  Fly    13 LTELKIAVIGAPSVGKSALIVRFLTKRYIGEYDHQTENRYKHEAMVDGEPVLFEILDTCPKAEDE 77

  Fly    64 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGK 128
            :....:| ::...|.:||||||.:.:||.::..:..:     ..|.|:.|..||.|:...|.|.:
  Fly    78 YPNAAEL-VQWADGLLLVYSITDRKSFNYIRRAKSDL-----QSDTPVQLCANKVDMVHLRQVSR 136

  Fly   129 ELGKNLATQFNCAFMETSAKAKVN-VNDIFYDLVRQINKKSPEKKQKKPKKSL 180
            :.|:.||..|.|.|.|.||...|: |.::|.:|.:::.....:.||...::.|
  Fly   137 DEGEILAKDFECKFSEVSAADHVDQVAEVFNELCKEVLASKRKSKQSLLERML 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 56/164 (34%)
CG8519NP_648054.2 small_GTPase 14..173 CDD:197466 56/164 (34%)
P-loop_NTPase 17..173 CDD:304359 55/161 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452975
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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