DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rap1b

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_955827.1 Gene:rap1b / 321107 ZFINID:ZDB-GENE-030131-9662 Length:184 Species:Danio rerio


Alignment Length:185 Identity:159/185 - (85%)
Similarity:171/185 - (92%) Gaps:2/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            |||||:|||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Zfish     1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130
            |||||||||||||.|||||||||||||||||||||||||.||||||:|||||||||:|||||||.
Zfish    66 AMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKGTDDVPMILVGNKCDLEDERVVGKEQ 130

  Fly   131 GKNLATQFN-CAFMETSAKAKVNVNDIFYDLVRQINKKSPEKKQKKPKKSLCVLL 184
            |:|||.|:| |||:|:|||:|:|||:||||||||||:|:| ...|..|||.|.||
Zfish   131 GQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINRKTP-VTGKPRKKSTCQLL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 146/162 (90%)
rap1bNP_955827.1 Rap1 3..167 CDD:133375 147/163 (90%)
Effector region. /evidence=ECO:0000305 32..40 7/7 (100%)

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