Protein Alignment Rap1 and rap-3

DIOPT Version :10

• Sequence 1: NP_476857.1
• Gene: Rap1 / 38244
• FlyBaseID: FBgn0004636
• Length: 184
• Species: Drosophila melanogaster
• Sequence 2: NP_502095.2
• Gene: rap-3 / 182417
• WormBaseID: WBGene00004309
• Length: 205
• Species: Caenorhabditis elegans
• Alignment Length: 199
• Identity: 94/199 - (47%)
• Similarity: 122/199 - (61%)
• Gaps: 16/199 - (8%)

  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFT 65
            |:||||||||:|||||||||:|:||.|||..||.||||||||..:||.:...|||||||||||||
 Worm     1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAGTEQFT 65

  Fly    66 AMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKEL 130
            .||:.|.:..||||||:|:...|||.:|:.....|:.::. .:|||:|||||.||.|.|.|.:..
 Worm    66 GMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRG-KEVPMILVGNKSDLAETRQVDESE 129

  Fly   131 GKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSP---------------EKKQKKPKKSL 180
            ..|.|.:....:.||||:...||:::|.:....|.|.:.               :||.|...:|.
 Worm   130 AHNFAEKLKIPYFETSARLNQNVSEVFEECAVLIQKSAKPNIERRKWSSESEIGDKKCKNWLRSC 194

  Fly   181 CVLL 184
            |..|
 Worm   195 CCCL 198

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rap1	NP_476857.1	Rap1	3..165	CDD:133375	85/161 (53%)
rap-3	NP_502095.2	small_GTPase	2..166	CDD:197466	86/164 (52%)