DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rheb-1

DIOPT Version :9

Sequence 1:NP_001189023.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_499079.1 Gene:rheb-1 / 176327 WormBaseID:WBGene00010038 Length:207 Species:Caenorhabditis elegans


Alignment Length:189 Identity:65/189 - (34%)
Similarity:104/189 - (55%) Gaps:17/189 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRD 69
            |:.|:|...||||||.::|.|.||.|:|:.||||.:.|.:....:...|.:.||||.:::|....
 Worm    15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVTDTAGQQEYTVFPR 79

  Fly    70 LYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGKNL 134
            ....:..||:|||:|..:.:|....::.|:|:|......:|:|:||||.||..:|||..|.|:.|
 Worm    80 SCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEEL 144

  Fly   135 ATQFNCAFMETSAKAKVNVNDIFYDLVRQIN-----------------KKSPEKKQKKP 176
            |.|::..|:|.:|:....|:::|..|:|:|.                 |::|.|...||
 Worm   145 ARQWDAKFVEITARESNRVHEVFELLLREIEISRGNLSPTERPNGNSPKRNPFKDDGKP 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_001189023.1 Rap1 3..165 CDD:133375 59/159 (37%)
rheb-1NP_499079.1 RheB 13..207 CDD:206709 65/189 (34%)
small_GTPase 13..177 CDD:197466 60/161 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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