DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and LOC1279951

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_061513760.1 Gene:LOC1279951 / 1279951 VectorBaseID:AGAMI1_011707 Length:231 Species:Anopheles gambiae


Alignment Length:188 Identity:52/188 - (27%)
Similarity:86/188 - (45%) Gaps:35/188 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRD 69
            :|.|||:..||||||||:::...|:.:|....:..|::.|.:|.....:||:|.:.         
Mosquito    13 RIAVLGNVNVGKSALTVRYLTRRFIGEYSSNTDLLYKQTVTLDSGVLDVEIVDISA--------- 68

  Fly    70 LYMKNGQGF-----------VLVYSITAQSTFNDLQDLREQILRVKDTDDVPMV-LVGNKCDLEE 122
               :|..||           ::|||||.::::...|   ..:..::...:.|.. |||||.||:.
Mosquito    69 ---ENDNGFPVEQIQWADACLIVYSITDRASYEYAQ---RSLAELRQLQNAPSAYLVGNKADLDH 127

  Fly   123 ERVVGKELGKNLATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSPEKKQK--KPKK 178
            .|.|.:..|.:||......|.|      |:|.|....|.:...:...|.:.:  ||:|
Mosquito   128 LREVQETEGASLAASHAIGFCE------VSVADNTPALYKAFERLLVESRARPVKPRK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 48/171 (28%)
LOC1279951XP_061513760.1 None

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