DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and LOC1276691

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_061502699.1 Gene:LOC1276691 / 1276691 VectorBaseID:AGAMI1_012542 Length:215 Species:Anopheles gambiae


Alignment Length:188 Identity:62/188 - (32%)
Similarity:99/188 - (52%) Gaps:28/188 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILD-------- 57
            :.|.|:.|:|:..||||||||:|:...::.:||...|:.::.::.|||:..:.||.|        
Mosquito    13 LAEIKVAVIGAPCVGKSALTVRFLTKRYIGEYDHQAENRHKYEIMVDGEAVLCEIWDTCPKIEEN 77

  Fly    58 ------TAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGN 116
                  |||:|.        ::...|.:||||||.:.:||.::..:|::     ..|:|:.||||
Mosquito    78 AEALSLTAGSET--------VQWADGLLLVYSITDRDSFNFIRRAKEEL-----AGDLPVALVGN 129

  Fly   117 KCDLEEERVVGKELGKNLATQFNCAFMETSAKAKV-NVNDIFYDLVRQINKKSPEKKQ 173
            |.|:...|.|..:.|:.||..|.|.|.|.||...| .|.:.|.:|.|::.....:.||
Mosquito   130 KVDMVHLRQVSTDEGEILAKDFECKFFEISAAEHVYQVAEAFLELCREVLTGKRKSKQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 60/176 (34%)
LOC1276691XP_061502699.1 None

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