DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and LOC1270628

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_061510319.1 Gene:LOC1270628 / 1270628 VectorBaseID:AGAMI1_001777 Length:278 Species:Anopheles gambiae


Alignment Length:188 Identity:70/188 - (37%)
Similarity:109/188 - (57%) Gaps:12/188 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            :|||::|:..||||:|..||:...|..||..|:|:.:.....|.|....|:||||:|:.:|.|||
Mosquito    45 HKIVMMGAAKVGKSSLITQFLYSSFSPKYKRTVEEMHHGHFSVGGVNLTLDILDTSGSYEFPAMR 109

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEE----RVVGKE 129
            .|.:.:...|:|||.:|...||.:::.:||||..:|.|..||:|:||||.||.:|    |.|.::
Mosquito   110 ALSISSADAFILVYDVTDSITFEEVKAIREQIHEIKSTTAVPIVVVGNKTDLSDEDEDLRQVARD 174

  Fly   130 LGKNLAT-QFNCAFMETSAKAKVNVNDIFYDLVRQIN---KKSP----EKKQKKPKKS 179
            ..:::.| .:...|:|.|||...||..||.:|:.|..   ..||    .::|..|:::
Mosquito   175 TTESMVTVDWENGFVEASAKLNRNVTQIFKELLVQAKITYNLSPALRRRRRQSLPQQA 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 66/165 (40%)
LOC1270628XP_061510319.1 None

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