DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and LOC1270373

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_309095.5 Gene:LOC1270373 / 1270373 VectorBaseID:AGAMI1_005644 Length:286 Species:Anopheles gambiae


Alignment Length:186 Identity:72/186 - (38%)
Similarity:116/186 - (62%) Gaps:8/186 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAM 67
            :|::||.|:||||||:|.::|::..|.|.|.|||||:||:.:..:...|.|:|.||.|:.||.||
Mosquito    23 DYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAM 87

  Fly    68 RDLYMKNGQGFVLVYSITAQSTFNDLQDLREQI--LRVKDTDDVPMVLVGNKCDLEEE-RVVGKE 129
            :.|.:..|..|:||||:.::.:..:|:.:...|  |:.::...:|::|||||||..|: |.|...
Mosquito    88 QRLSITKGHAFILVYSVCSKQSLEELRPIWSLIRELKGEEISQIPVMLVGNKCDESEDLREVTNI 152

  Fly   130 LGKNLATQFNCAFMETSAKAKVNVNDIFYDLV-----RQINKKSPEKKQKKPKKSL 180
            .|:..|..:..:|||||||...||.::|.:|:     |.::.:...|.:||.||.:
Mosquito   153 EGQTEAATWGVSFMETSAKENHNVTELFQELLNMEKNRNVSLQLDGKNKKKNKKKM 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 67/169 (40%)
LOC1270373XP_309095.5 None

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