DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and Ralb

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_446273.1 Gene:Ralb / 116546 RGDID:619852 Length:206 Species:Rattus norvegicus


Alignment Length:192 Identity:94/192 - (48%)
Similarity:133/192 - (69%) Gaps:11/192 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:||::..::||||||.|.:.|:|
  Rat    15 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 79

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVK-DTDDVPMVLVGNKCDLEEERVVGKELGK 132
            |.|.::|:||:||:|||...:|....:.|||||||| :.|.:|:::||||.||||.|.|..|..:
  Rat    80 DNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVEEAR 144

  Fly   133 NLATQFNCAFMETSAKAKVNVNDIFYDLVRQIN-KKSPEKKQK------KPKKSL---CVLL 184
            ..|.::...::|||||.:.||:.:|:||:|:|. ||..|.|.|      |.|||.   |.||
  Rat   145 GKAEEWGVQYVETSAKTRANVDKVFFDLMREIRAKKMSENKDKNGRKSGKSKKSFKERCCLL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 81/161 (50%)
RalbNP_446273.1 RalA_RalB 15..178 CDD:206710 82/162 (51%)
Effector region 43..51 4/7 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..206 8/24 (33%)

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