DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and mrasa

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_003199272.1 Gene:mrasa / 100536317 ZFINID:ZDB-GENE-110411-67 Length:208 Species:Danio rerio


Alignment Length:195 Identity:98/195 - (50%)
Similarity:130/195 - (66%) Gaps:14/195 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMR 68
            ||:||:|.|||||||||:||.|.|||..|||||||||.|..|:|||..:|::|||||.|:|:|||
Zfish    14 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDGQWAILDVLDTAGQEEFSAMR 78

  Fly    69 DLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKDTDDVPMVLVGNKCDLEEERVVGKELGKN 133
            :.||:.|.||::|:|:|.:::|..:....:.||||||.:..|||||.||.||...|.|..|.|..
Zfish    79 EQYMRTGDGFLIVFSVTDKASFEHVDRFHQLILRVKDRESFPMVLVANKVDLVHLRKVTNEQGCE 143

  Fly   134 LATQFNCAFMETSAK-AKVNVNDIFYDLVRQINKKSPE---KKQKKPK----------KSLCVLL 184
            :|.:.|..::||||| ..:||...|::|||.|.::.||   ||:||.|          |..||:|
Zfish   144 MAAKHNITYIETSAKDPPMNVERAFHELVRVIRQQVPEHSLKKKKKMKWRGDRAMNSHKLHCVIL 208

  Fly   185  184
            Zfish   209  208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 86/161 (53%)
mrasaXP_003199272.1 P-loop containing Nucleoside Triphosphate Hydrolases 12..176 CDD:476819 86/161 (53%)

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