DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rergl

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_017947954.1 Gene:rergl / 100491594 XenbaseID:XB-GENE-6037390 Length:235 Species:Xenopus tropicalis


Alignment Length:172 Identity:66/172 - (38%)
Similarity:96/172 - (55%) Gaps:9/172 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQVEVDGQQCMLEILD----TAGTEQ 63
            |..|:|||:.|||||||||:|:...|:.:|. .:|..|...|.|||::.:..|.|    ...||:
 Frog    35 EANILVLGADGVGKSALTVRFLTRRFIGEYG-ELESIYSHNVCVDGKEVIFNIWDFPYAKDPTEE 98

  Fly    64 FTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRVKD---TDDVPMVLVGNKCDLEEERV 125
            ..|..:..|:...|:||||||..:::||.:....:.|...||   .:.:|:|:||||.||...|.
 Frog    99 SCAEEEKRMQWADGYVLVYSICDRASFNVMCQTIQLIKTAKDCLGAEKLPIVIVGNKRDLHHLRA 163

  Fly   126 VGKELGKNLATQFNCAFMETS-AKAKVNVNDIFYDLVRQINK 166
            |..|.|:.||...:|.|.|.| |:|...|..:|:.||.:|.:
 Frog   164 VSSEEGRLLALSMDCDFYEVSAAEAYHGVLMVFHGLVDKIRE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 65/169 (38%)
rerglXP_017947954.1 P-loop containing Nucleoside Triphosphate Hydrolases 37..205 CDD:476819 65/168 (39%)

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