DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rap1 and rerg

DIOPT Version :10

Sequence 1:NP_476857.1 Gene:Rap1 / 38244 FlyBaseID:FBgn0004636 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_031753456.1 Gene:rerg / 100134997 XenbaseID:XB-GENE-489597 Length:228 Species:Xenopus tropicalis


Alignment Length:207 Identity:67/207 - (32%)
Similarity:109/207 - (52%) Gaps:31/207 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EYKIVVLGSGGVGKS-----------------------------ALTVQFVQCIFVEKYDPTIED 38
            |.||.:||..|||||                             :|.|:|:...|:.:||||:|.
 Frog     6 EVKIAILGRAGVGKSGSYLLLGHEWVIKKTAVKCTAHLHHQASLSLVVRFLTKRFIWEYDPTLES 70

  Fly    39 SYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILRV 103
            :||.|..:|.....:|:|||||.|. |..|:.:::...||.:||.||.:.:|:::...:..:..:
 Frog    71 TYRHQATIDDDLVTMELLDTAGQED-TIQREGHVRWADGFAIVYDITDKGSFDEVLPFKNLLDEI 134

  Fly   104 KDTDDVPMVLVGNKCDLEEERVVGKELGKNLATQFNCAFMETSA-KAKVNVNDIFYDLVRQINKK 167
            |...:|..:|||||.||:..|.|..|.|:.|||:..|||.|.|| ..:.|:::.||:|.|::.::
 Frog   135 KKPKNVTFILVGNKADLDHCRQVSTEEGEKLATELACAFYECSACTGEGNISEAFYELCREVRRR 199

  Fly   168 SPEKKQKKPKKS 179
            ...:.:.:.:.|
 Frog   200 KMVQGKTRRRSS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap1NP_476857.1 Rap1 3..165 CDD:133375 66/191 (35%)
rergXP_031753456.1 RERG_RasL11_like 8..198 CDD:206713 65/190 (34%)

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