DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12024 and cuedc1a

DIOPT Version :10

Sequence 1:NP_647670.3 Gene:CG12024 / 38243 FlyBaseID:FBgn0035283 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001417829.1 Gene:cuedc1a / 768297 ZFINID:ZDB-GENE-061027-344 Length:403 Species:Danio rerio


Alignment Length:403 Identity:111/403 - (27%)
Similarity:161/403 - (39%) Gaps:160/403 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QLEFSQAMTDFKKMFPDIDREVIEAILRANLGAVDQTIDALLAMSIDNQNEKLRNELDANVSPQ- 68
            :|||||||.|||.|||.::.||||.:||||.||||.|||.||.||:|:|.....::.:.::.|: 
Zfish    34 RLEFSQAMDDFKTMFPSMEHEVIECVLRANHGAVDSTIDQLLQMSLDSQATDDSSDSEDSIPPEI 98

  Fly    69 -QSLINLNDSDR-----------DLQLVDTTDGGGAGAVGAPGAPSALLPTAG--ASPNHQNTGA 119
             :..:..:.||.           |:.:.|...        ....||...|...  ..|.||..| 
Zfish    99 LERTLEPDSSDEEPPPIYAPPSYDMHIYDRKH--------PADVPSTPPPRFNDYPPPGHQQVG- 154

  Fly   120 SPKQRPLGAANSKGSSQNNTPTKRSRRWNPPILGPLPAGFLRITPA------------------- 165
                                   |.|.||||:||.||..||||.|.                   
Zfish   155 -----------------------RYRNWNPPLLGNLPDDFLRILPQQSESLQRSQSSLSQPSSSS 196

  Fly   166 ----------------------PGQQDFE----LPDEQFALMLQNEEFMNQLRWNQDFMNALEKE 204
                                  |.:||.:    |.||:.||.|||:|||.:|:.|:||:.|||.:
Zfish   197 SSSLSSLTQLSSSSGALSGGVWPSEQDRKLKQYLEDERIALFLQNQEFMKELQRNRDFLIALEID 261

  Fly   205 Q---------------SGKAKGE------------DDAPFQERLKNMGKMSRKKFLQMARVFT-- 240
            :               ...|:|:            |||.|.|:||:|||.:|||..::||.|:  
Zfish   262 RQRCENTQCGHSSACTENSAEGDNCSSEEACSSASDDALFLEKLKHMGKSTRKKLFEIARSFSEK 326

  Fly   241 --WQRNKKVTTAK---------------------------------QIDSLPLREEPSDDEDHHH 270
              .:::||...||                                 :|:.||    .::|:.||.
Zfish   327 TRRKKSKKRALAKHQSYPAHVSSLDSHCQRVAPTLGSATSTVNLLDEIEGLP----QAEDDSHHK 387

  Fly   271 QQRDQQQASQSSQ 283
            :...:::..:|.:
Zfish   388 RPSGREEGEESKE 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12024NP_647670.3 CUE_CUED1 7..48 CDD:270549 29/40 (73%)
cuedc1aNP_001417829.1 CUE_CUED1 36..77 CDD:270549 29/40 (73%)

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