DRSC/TRiP Functional Genomics Resources

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Protein Alignment JTBR and Jtb

DIOPT Version :10

Sequence 1:NP_477403.1 Gene:JTBR / 38235 FlyBaseID:FBgn0025820 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_062086.1 Gene:Jtb / 29439 RGDID:2942 Length:146 Species:Rattus norvegicus


Alignment Length:149 Identity:45/149 - (30%)
Similarity:68/149 - (45%) Gaps:10/149 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MLLGLGAL------TMVTILVLFVESRYAADGPRRREPQFVIEDNSTCWRNEKYTMVQECHPCSE 68
            ||:|.|..      .:..:|..|......|:.|.|.|...|....|.||..|::.:.:||.|||.
  Rat     1 MLVGAGRRGLPRGGHLCWLLCAFTLKLCEAEAPVREEKLSVSTSTSPCWLVEEFVVTEECTPCSN 65

  Fly    69 FDIVSRSLGVCIHTHYKEVLRCQSGE-IVTRSCDRVALIEQMNFLKFEVSCFVIGLLSYLVSYAR 132
            |.|  ::...|..|.|.|.:.|.|.: ...:|| |.||:||..|.|||.....:.|:...:...|
  Rat    66 FQI--KTTPECGSTGYVEKITCSSSKRNEFKSC-RSALLEQHLFWKFEGIVVGVALVFACLVIIR 127

  Fly   133 DRVLSRRNYMRIERQLNRV 151
            .|.|.|:...::.:|:..:
  Rat   128 QRQLDRKALEKVRKQIESI 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JTBRNP_477403.1 JTB 40..148 CDD:398872 35/108 (32%)
JtbNP_062086.1 JTB 37..143 CDD:398872 35/108 (32%)

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