DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12020 and Dnajb3

DIOPT Version :9

Sequence 1:NP_647662.1 Gene:CG12020 / 38233 FlyBaseID:FBgn0035273 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001102866.1 Gene:Dnajb3 / 680216 RGDID:1594215 Length:241 Species:Rattus norvegicus


Alignment Length:154 Identity:42/154 - (27%)
Similarity:73/154 - (47%) Gaps:24/154 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LDYYAVLDQPRGATKEQITLAYRRLAIRLCPHRDKKDEQDFVPLAQEGRLTHLSPMGEPRQWAYV 70
            :|||.||..||.|:.|.|..|||:||::..|.::.:.:::                 ..|::..|
  Rat     2 VDYYEVLGVPRQASAEAIRKAYRKLALKWHPDKNPEHKEE-----------------AERRFKQV 49

  Fly    71 NMAFDVLGNDLYRAIYDRFGEAG-LFEGVMLPNGYFPPYQY---DGDHMKVYERVFGSYSPYANV 131
            ..|::||.:...|.:|||.||.| :..|....:.:...:||   ..|..:|:...||.:.|::  
  Rat    50 AQAYEVLSDARKREVYDRCGEVGEVGGGGAAGSPFHDAFQYVFSFRDPAEVFREFFGGHDPFS-- 112

  Fly   132 IDAISNP-PSLYATRQHGIGVRSK 154
            .|...:| .:.:..|:...|.||:
  Rat   113 FDFFGDPLENFFGDRRSTRGSRSR 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12020NP_647662.1 DnaJ 7..352 CDD:223560 42/153 (27%)
DnaJ 7..87 CDD:278647 22/79 (28%)
DnaJ_C 156..335 CDD:199909
Dnajb3NP_001102866.1 DnaJ 3..66 CDD:395170 22/79 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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