DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12020 and dnj-20

DIOPT Version :9

Sequence 1:NP_647662.1 Gene:CG12020 / 38233 FlyBaseID:FBgn0035273 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001370249.1 Gene:dnj-20 / 174514 WormBaseID:WBGene00001038 Length:355 Species:Caenorhabditis elegans


Alignment Length:381 Identity:94/381 - (24%)
Similarity:152/381 - (39%) Gaps:86/381 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DYYAVLDQPRGATKEQITLAYRRLAIRLCPHRDKKDEQDFVPLAQEGRLTHLSPMGEPRQWAYVN 71
            |:|.:|...:.|...||..|||:||..|.|.|::.||     :|.|             ::..::
 Worm    24 DFYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDE-----MANE-------------KFQDLS 70

  Fly    72 MAFDVLGNDLYRAIYDRFGEAGLFE-GVMLPNGYFPPYQYDGDHMKVYERVFGSYSPYAN----- 130
            .|::||.:...||:|||.||.|:.: |.....|:.|...:.||       .||....:..     
 Worm    71 SAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFSSFFGD-------FFGGGGGHGGEEGTP 128

  Fly   131 -----VIDAISNPPSLYATRQHGIGVRSKDASTERII---------ELSLEEVRTGCVKLMNVWR 181
                 .||.......:|  ..|.:.::.|.|..::..         |:..|::..|..::..|  
 Worm   129 KGADVTIDLFVTLEEVY--NGHFVEIKRKKAVYKQTSGTRQCNCRHEMRTEQMGQGRFQMFQV-- 189

  Fly   182 QEIVD-AKESRLEKRKHTLKLNIAPGTTAGTRFCFKEEGDRYPATIPGDIIFIAADKPHPDFERR 245
             ::.| ....:|.:....|::.:..|...|.:..|..||:.:....|||:.|....:.||.|||:
 Worm   190 -KVCDECPNVKLVQENKVLEVEVEVGADNGHQQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFERK 253

  Fly   246 NQHDLVYRQSIGLCQAFTGFTFFICTLDRRQLKVVITDVVQPGYTKVVPLEGLPKCRNLDAVTAI 310
            .. ||....:|.|..|..||...|..||...:||....|..||.......||:|         ::
 Worm   254 GD-DLYTNVTISLQDALNGFEMEIQHLDGHIVKVQRDKVTWPGARLRKKDEGMP---------SL 308

  Fly   311 KEANKKVEQFGDLIIEFDYIFPKYLTPHMKHITREFFREFRKLEIELEEEEERNMV 366
            ::.|||    |.|::.||..|||                     .||.:|::..::
 Worm   309 EDNNKK----GMLVVTFDVEFPK---------------------TELSDEQKAQII 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12020NP_647662.1 DnaJ 7..352 CDD:223560 91/365 (25%)
DnaJ 7..87 CDD:278647 23/79 (29%)
DnaJ_C 156..335 CDD:199909 50/188 (27%)
dnj-20NP_001370249.1 DnaJ 23..350 CDD:223560 94/381 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.