DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12020 and shv

DIOPT Version :10

Sequence 1:NP_647662.1 Gene:CG12020 / 38233 FlyBaseID:FBgn0035273 Length:366 Species:Drosophila melanogaster
Sequence 2:XP_317136.5 Gene:shv / 1277658 VectorBaseID:AGAMI1_011309 Length:359 Species:Anopheles gambiae


Alignment Length:389 Identity:97/389 - (24%)
Similarity:149/389 - (38%) Gaps:102/389 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DYYAVLDQPRGATKEQITLAYRRLAIRLCPHRDKKDEQDFVPLAQEGRLTHLSPMGEPRQWAYVN 71
            |:|.:|...:.|:|..:..|||:||..|.|.::|.|     |.|.:             ::..:.
Mosquito    29 DFYKILGLRKTASKNDVKKAYRKLAKELHPDKNKDD-----PDASQ-------------KFQDLG 75

  Fly    72 MAFDVLGNDLYRAIYDRFGEAGLFEGVMLPNGYFPPY-QYDGD---------------------- 113
            .|::||.:|..|.:|||.||..:.:..|:.|  ..|: |:.||                      
Mosquito    76 AAYEVLSDDDKRKLYDRCGEECVKKEGMMDN--TDPFAQFFGDFGFGFGGQEQRETPRGANIVMD 138

  Fly   114 -HMKVYERVFGSYSPYANVIDAISNPPSLYATRQHGIGVRSKDASTERII----ELSLEEVRTGC 173
             |:.:.|...|      |.::...|.|.:            |.||..|..    |:....:..|.
Mosquito   139 LHVTLEELYSG------NFVEITRNKPVM------------KPASGTRKCNCRQEMVTRNLGPGR 185

  Fly   174 VKLMNVWRQEIVD-AKESRLEKRKHTLKLNIAPGTTAGTRFCFKEEGDRYPATIPGDIIFIAADK 237
            .::|   :|.:.| ....:|...:.|:::.|.||...|....|..||:.:....|||:|......
Mosquito   186 FQMM---QQTVCDECPNVKLVNEERTIEIEIEPGMENGQETRFSGEGEPHMDGEPGDLILKIKTV 247

  Fly   238 PHPDFERRNQHDLVYRQSIGLCQAFTGFTFFICTLDRRQLKVVITDVVQPGYTKVVPLEGLPKCR 302
            ||..||||.. ||....:|.|..|..|||..|..||..::.|....|..||.......||:|...
Mosquito   248 PHARFERRGD-DLYTNITISLQDALVGFTLDIVHLDGHKVTVTREKVTWPGARIRKNGEGMPNYE 311

  Fly   303 NLDAVTAIKEANKKVEQFGDLIIEFDYIFPKYLTPHMKHITREFFREFRKLEIELEEEEERNMV 366
            |.:.             .|.|.|.||..|||      ..:|            :.|:|:.:|::
Mosquito   312 NNNL-------------HGTLYITFDVEFPK------SQLT------------DTEKEDIKNLL 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12020NP_647662.1 PRK14289 7..299 CDD:237660 83/320 (26%)
DnaJ_C 156..335 CDD:199909 54/183 (30%)
shvXP_317136.5 None

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