DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and SMB1

DIOPT Version :9

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_010946.3 Gene:SMB1 / 856751 SGDID:S000000831 Length:196 Species:Saccharomyces cerevisiae


Alignment Length:96 Identity:30/96 - (31%)
Similarity:51/96 - (53%) Gaps:18/96 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDEC-HERVFST-----------------T 48
            |.|.:.|::.:.::|.|||.:||.|..||:.:|::::|| .|||..|                 .
Yeast    10 SRLANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGTTLN 74

  Fly    49 SGIEQIVLGLHIIRGDNIAVIGLIDETIDSR 79
            ..:|:.||||.|:||:.|....:.|:.:.|:
Yeast    75 IKVEKRVLGLTILRGEQILSTVVEDKPLLSK 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 30/96 (31%)
SMB1NP_010946.3 Sm_B 8..98 CDD:212464 28/87 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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