DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and SME1

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_014802.3 Gene:SME1 / 854330 SGDID:S000005685 Length:94 Species:Saccharomyces cerevisiae


Alignment Length:67 Identity:21/67 - (31%)
Similarity:35/67 - (52%) Gaps:4/67 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQI----VLGLHIIRGDNIAVIGL 71
            |:.:....|....|.:.|||:.:|::|||..|...::..|.|.:    .||..:::||||.:|..
Yeast    28 TIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLITS 92

  Fly    72 ID 73
            .|
Yeast    93 AD 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 21/67 (31%)
SME1NP_014802.3 Sm_E 7..92 CDD:212465 20/63 (32%)

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