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Protein Alignment CG2021 and LSM8
DIOPT Version :9
Sequence 1: | NP_647660.1 |
Gene: | CG2021 / 38229 |
FlyBaseID: | FBgn0035271 |
Length: | 95 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001185323.1 |
Gene: | LSM8 / 842881 |
AraportID: | AT1G65700 |
Length: | 141 |
Species: | Arabidopsis thaliana |
Alignment Length: | 137 |
Identity: | 59/137 - (43%) |
Similarity: | 75/137 - (54%) |
Gaps: | 43/137 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFST------------------- 47
:|||:.::..:|:||.||||.:|.||||||..|||:||.|||||||
plant 5 TGLETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKCHLFNRILRKLTQIFKIG 69
Fly 48 --------------TS----------GIEQIVLGLHIIRGDNIAVIGLIDETIDSRLDLANIRGE 88
|| |::|.||||:|||||||.|||.:||.:|:.||.:.:|..
plant 70 LVLQFFVCMSGHVDTSLDKCSWIFLEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKLRAH 134
Fly 89 PLGPVVH 95
||.||||
plant 135 PLKPVVH 141
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG2021 | NP_647660.1 |
LSm8 |
1..91 |
CDD:212474 |
54/131 (41%) |
LSM8 | NP_001185323.1 |
LSm8 |
7..137 |
CDD:212474 |
53/129 (41%) |
Information from Original Tools:
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