DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and LSM6A

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_191540.1 Gene:LSM6A / 825150 AraportID:AT3G59810 Length:91 Species:Arabidopsis thaliana


Alignment Length:91 Identity:23/91 - (25%)
Similarity:40/91 - (43%) Gaps:19/91 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGLESYINHT---------------VSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSG 50
            |||:|..::.|               |.:....|.::.|||...|..:||.:::..|.|    :|
plant     1 MSGVEEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYV----NG 61

  Fly    51 IEQIVLGLHIIRGDNIAVIGLIDETI 76
            ..:...|...|||:|:..|..::.|:
plant    62 QLKNKYGDAFIRGNNVLYISTVNMTV 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 23/91 (25%)
LSM6ANP_191540.1 LSm6 14..81 CDD:212473 16/70 (23%)

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