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Protein Alignment CG2021 and LSM1B
DIOPT Version :10
| Sequence 1: | NP_647660.1 |
Gene: | CG2021 / 38229 |
FlyBaseID: | FBgn0035271 |
Length: | 95 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_566476.1 |
Gene: | LSM1B / 820624 |
AraportID: | AT3G14080 |
Length: | 128 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 75 |
Identity: | 29/75 - (38%) |
| Similarity: | 46/75 - (61%) |
Gaps: | 7/75 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQ---IVLGLHIIRG 63
:.|.||::..:.::..|||..:|||:.|||..|.:::...|||... || |.|||::|||
plant 13 TSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVG----EQYCDIPLGLYVIRG 73
Fly 64 DNIAVIGLID 73
:|:.:||.:|
plant 74 ENVVLIGELD 83
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG2021 | NP_647660.1 |
LSm8 |
1..91 |
CDD:212474 |
29/75 (39%) |
| LSM1B | NP_566476.1 |
LSm1 |
12..82 |
CDD:212475 |
28/72 (39%) |
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