DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and Snrpgl1

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_001396106.1 Gene:Snrpgl1 / 687679 RGDID:1583028 Length:76 Species:Rattus norvegicus


Alignment Length:70 Identity:24/70 - (34%)
Similarity:45/70 - (64%) Gaps:4/70 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAV 68
            |:.:::..:|:....||:..|.|:|||..:|::||||.|   ..||| :|..:|:.:|||::|.:
  Rat     9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE---MATSG-QQNNIGMVVIRGNSIIM 69

  Fly    69 IGLID 73
            :..::
  Rat    70 LEALE 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 24/70 (34%)
Snrpgl1NP_001396106.1 Sm_G 5..74 CDD:212466 24/68 (35%)

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