DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2021 and LSM8

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_057284.1 Gene:LSM8 / 51691 HGNCID:20471 Length:96 Species:Homo sapiens


Alignment Length:94 Identity:65/94 - (69%)
Similarity:79/94 - (84%) Gaps:0/94 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNI 66
            |.||:|||.||::||:|||..:|||||||||||:|:||.||||||::.|:||:||||:|:||||:
Human     3 SALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67

  Fly    67 AVIGLIDETIDSRLDLANIRGEPLGPVVH 95
            ||||.|||..||.|||.|||.|||..|.|
Human    68 AVIGEIDEETDSALDLGNIRAEPLNSVAH 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 62/88 (70%)
LSM8NP_057284.1 LSm8 3..92 CDD:212474 62/88 (70%)

Return to query results.
Submit another query.