DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and snrpe

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_001005147.1 Gene:snrpe / 448738 XenbaseID:XB-GENE-5922245 Length:92 Species:Xenopus tropicalis


Alignment Length:46 Identity:15/46 - (32%)
Similarity:28/46 - (60%) Gaps:3/46 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVI 69
            |.:.|||:.:|:::|:..|....|.|..:   ||..:::||||.::
 Frog    45 GCIIGFDEYMNLVLDDAEEIHLKTKSRKQ---LGRIMLKGDNITLL 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 15/46 (33%)
snrpeNP_001005147.1 Sm_E 11..89 CDD:212465 15/46 (33%)

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