DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and SmE

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_609162.1 Gene:SmE / 34080 FlyBaseID:FBgn0261790 Length:94 Species:Drosophila melanogaster


Alignment Length:54 Identity:17/54 - (31%)
Similarity:31/54 - (57%) Gaps:3/54 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLIDETID 77
            |.:.|||:.:|:::|:..|....|.   ::..||..:::||||.:|..:..|.|
  Fly    44 GHIVGFDEYMNLVLDDAEEVYVKTR---QRRNLGRIMLKGDNITLIQNVSPTKD 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 17/54 (31%)
SmENP_609162.1 Sm_E 10..88 CDD:212465 15/46 (33%)

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