DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and lsm-6

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_001379827.1 Gene:lsm-6 / 190601 WormBaseID:WBGene00003080 Length:77 Species:Caenorhabditis elegans


Alignment Length:66 Identity:18/66 - (27%)
Similarity:30/66 - (45%) Gaps:4/66 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAV 68
            |:..|...|.:....|.::.|.|...|..:||.:::..|    .::|..|...|...|||:|:..
 Worm    11 LKKVIGKPVVVKLNSGVDYRGILACLDGYMNIALEQTEE----YSNGQLQNKYGDAFIRGNNVLY 71

  Fly    69 I 69
            |
 Worm    72 I 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 18/66 (27%)
lsm-6NP_001379827.1 LSm6 6..73 CDD:212473 18/66 (27%)

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