DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2021 and LSm1

DIOPT Version :10

Sequence 1:NP_647660.1 Gene:CG2021 / 38229 FlyBaseID:FBgn0035271 Length:95 Species:Drosophila melanogaster
Sequence 2:XP_321407.3 Gene:LSm1 / 1281490 VectorBaseID:AGAMI1_003627 Length:134 Species:Anopheles gambiae


Alignment Length:80 Identity:27/80 - (33%)
Similarity:43/80 - (53%) Gaps:5/80 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 INHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIE--QIVLGLHIIRGDNIAVIG 70
            ::..:.::..|||..||.|:..||..|:::....||:.   .|.|  .|..|:.||||:|:.::|
Mosquito    15 VDKKLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIH---VGNEYGDIQRGVVIIRGENVVLLG 76

  Fly    71 LIDETIDSRLDLANI 85
            .||...:|.|.|..|
Mosquito    77 EIDREKESTLPLREI 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2021NP_647660.1 LSm8 1..91 CDD:212474 27/80 (34%)
LSm1XP_321407.3 LSm1 5..78 CDD:212475 21/65 (32%)

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