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Protein Alignment CG2021 and lsm8
DIOPT Version :9
Sequence 1: | NP_647660.1 |
Gene: | CG2021 / 38229 |
FlyBaseID: | FBgn0035271 |
Length: | 95 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002935003.2 |
Gene: | lsm8 / 100486227 |
XenbaseID: | XB-GENE-986008 |
Length: | 96 |
Species: | Xenopus tropicalis |
Alignment Length: | 94 |
Identity: | 65/94 - (69%) |
Similarity: | 80/94 - (85%) |
Gaps: | 0/94 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SGLESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNI 66
|.||:|||.||::||:|||..:|||||||||||:|:||.||||||::.|:||:||||:|:||||:
Frog 3 SALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
Fly 67 AVIGLIDETIDSRLDLANIRGEPLGPVVH 95
||||.|||..||.|||.|||.|||..||:
Frog 68 AVIGEIDEETDSALDLGNIRAEPLNSVVN 96
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG2021 | NP_647660.1 |
LSm8 |
1..91 |
CDD:212474 |
62/88 (70%) |
lsm8 | XP_002935003.2 |
LSm8 |
2..92 |
CDD:212474 |
62/88 (70%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
109 |
1.000 |
Domainoid score |
I6306 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H9419 |
Inparanoid |
1 |
1.050 |
138 |
1.000 |
Inparanoid score |
I4418 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1545004at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0005238 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto102733 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R671 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X4250 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 8.090 |
|
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