DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pol31 and cdc1

DIOPT Version :9

Sequence 1:NP_647659.1 Gene:Pol31 / 38228 FlyBaseID:FBgn0027903 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_594406.1 Gene:cdc1 / 2542083 PomBaseID:SPAC27E2.05 Length:462 Species:Schizosaccharomyces pombe


Alignment Length:466 Identity:149/466 - (31%)
Similarity:234/466 - (50%) Gaps:60/466 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ETKYENLSSIFRLKGHDYQKQFFHLYAHRLAEMTRLLTPLAQKKWGNKEPIKKLCELRGEQDVHC 70
            |||...||    |....|.:|:..:|..||..:...:|..|.|||.:|:.::::.:::.::|  |
pombe    12 ETKRLELS----LSQQTYSQQYASIYFARLTALRPRITEAASKKWPDKQRLERVLDVKSDED--C 70

  Fly    71 ILIGTIFKHQAHKPSILRDISEENQLAPQPPRQNYSDPED------KIVLEDELQRVRLQGK-LN 128
            .::.|.:...|.||:::.|:::.:.:........|..|||      :..|||:..|:...|. |.
pombe    71 WVVATAYMTTALKPNVMNDVTQLHTIVTTTEESPYVSPEDAASGDIEYALEDDYGRIDCSGSFLY 135

  Fly   129 GQLLATGVVCAALGGTDSDGFFNVEDI----LFYESGPQ-------KPLAPIKRSRLLVLASGLD 182
            ...:.||||.|.||..|..|.|.|.|:    :|..|.|.       :|......|.|.:...|::
pombe   136 DAGVVTGVVLAVLGHEDEQGRFVVVDVCFPGIFSHSIPMTTDESQAQPEYIAAVSGLGLSNDGIE 200

  Fly   183 QLQAHKFVEALNLFQYWLAGSLG--NNKEAGSMVRLIVAGN------SVRASAMAHVP--TLQVA 237
            .:|.|:.|:       :|.|:|.  ::....|:.|||:.||      .:..||.|.||  ..:|.
pombe   201 GIQVHQLVD-------FLRGTLPHVSSFSPSSIKRLIILGNCLAPSIEIADSASASVPIGKKKVK 258

  Fly   238 R----TQA-NANDTVQAVSQLDQWFASWARSLPVDIMPGPYDPANFMLPQQPFHKCMFPQAAQL- 296
            |    |.| |.|.|.    |||.:......|:.|.:||||||.::.:|||||.|..:..::... 
pombe   259 RYGYDTSAYNPNPTF----QLDNFLDQVCSSIDVTLMPGPYDYSSTILPQQPLHPALLTKSKVWL 319

  Fly   297 -ATFQAVTNPYSCRLDEALVVGTSGQNVSDLLRSTSLDSALEALRCTLTWGHVAPTAPDTLACYP 360
             ::.|.||||....|....|:.|||||::||.:.....|:|:.:..||.|.|:.||:||||.|||
pombe   320 GSSLQTVTNPTWLSLGNHFVLATSGQNINDLRKYHPKKSSLQCMENTLLWNHITPTSPDTLWCYP 384

  Fly   361 YIESDPFILRECPHVYYAGNCESFA--TELHEGSEGKRTRLVCVPSFSKTQSVAVVDLDTLDCRM 423
            :.:.|.|::.|.|.:|..||...|.  |.::||:   |.:||.||.|.||..:.::::.||:..:
pombe   385 FTDKDTFVMEEMPDLYLCGNQPKFGCKTVINEGN---RIQLVSVPEFRKTGVLVLINMHTLNVEI 446

  Fly   424 VNF---SVDAE 431
            :.|   ||.||
pombe   447 IQFRPMSVKAE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pol31NP_647659.1 MPP_PolD2_C 175..426 CDD:277333 92/269 (34%)
cdc1NP_594406.1 HYS2 1..460 CDD:224230 149/466 (32%)
MPP_PolD2_C 185..449 CDD:277333 94/277 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1461
eggNOG 1 0.900 - - E1_COG1311
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 198 1.000 Inparanoid score I1008
OMA 1 1.010 - - QHG54495
OrthoFinder 1 1.000 - - FOG0005088
OrthoInspector 1 1.000 - - oto100902
orthoMCL 1 0.900 - - OOG6_102286
Panther 1 1.100 - - LDO PTHR10416
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R344
SonicParanoid 1 1.000 - - X3610
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.