DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13933 and Asb18

DIOPT Version :10

Sequence 1:NP_647658.1 Gene:CG13933 / 38227 FlyBaseID:FBgn0035270 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_001101701.1 Gene:Asb18 / 316614 RGDID:1310850 Length:467 Species:Rattus norvegicus


Alignment Length:535 Identity:111/535 - (20%)
Similarity:185/535 - (34%) Gaps:164/535 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LHLACERGAWNCVQQLVVTRSEEINLIM----DEYYPIHHAVLHDGRFLELLIHQGAITTVRTCT 262
            |..|...|..:.||:|:.|..|.::.::    |::.....|.|..|..|      |.:..:::.|
  Rat    20 LKSALATGDRDTVQELICTEVEPVDAVLELANDDWMKEPSAKLPTGALL------GDLDHIQSLT 78

  Fly   263 QQMTLLHVVIFAARKSAED------TLATLRI----LLERGCKELINAPDSLGNTPLHALIVRYA 317
            .|......|:|..  |.|:      :|||..:    .||.. :||        .|||        
  Rat    79 DQCFWDANVVFEI--STEEMEWQVTSLATFGLSGLWTLEYK-REL--------TTPL-------- 124

  Fly   318 LEEARYGYDKWSKWDVLHLVRFLLQNGAKQSINQAGNSAM--ACVFRHLRDWEVCYELLSMLIKE 380
            ...|.:|::.        .||.||...|....:..|..|:  ||:..|    ..|..|   |::.
  Rat   125 CIAAAHGHES--------CVRHLLSRKADPDASPGGRGALHEACLGSH----TACARL---LLQH 174

  Fly   381 NGDPNIVGRDGSVPIMVLLVPLINKDHLHHFTHSMKVCYLNCIRMLLQHGA------NPNCSYRA 439
            ..||:::..:|..|:.:...|                ..|.|.:.||:|||      .||..   
  Rat   175 GADPDLLSSEGLAPLHLCRTP----------------ASLGCAQELLEHGATVQLEGGPNRD--- 220

  Fly   440 NLKPLHVLVFTVSEN----------------------FTLNCDAQKRTNFDFIKNILL--MLLQH 480
              .||||......:.                      .:..|.|..|:..:..:.:.|  :||:.
  Rat   221 --TPLHVAAQRGLDKHAQLYLGCGARVDARNGRGETALSAACGAAARSPEEHARCLRLCALLLRG 283

  Fly   481 GLDCNKTYQHILQAVMDM-VHNVRTCHDMECVYE---LTLTLIQYGADPNIVLSGKTTP-GTAIF 540
            |            |..|| ..:.|:.....|.:.   |...|::.|||.:.:..|..:| ..|:.
  Rat   284 G------------AATDMRDEDERSPLHKACGHARPGLCTLLLRNGADADALDYGGASPLARALQ 336

  Fly   541 SNELATFRSSFRTNSCYLLFYYIILITKKEFILND------PNATYTRVIHLFYLTMHHEPLFNC 599
            :...|...:..||               .:.:||.      |:| :.:|:...      .|:...
  Rat   337 TATCAPPTAPQRT---------------VQALLNHGSRSVWPDA-FPKVLRTC------APVPAV 379

  Fly   600 LKSLHNFYVAQVPSKK-----TEQLIALISSLYR-------RPRSLKQLSRWAIYEAMNRKLAQN 652
            ::.|.|.|.....|:.     .|::..:....||       .||.|:...|.||.:...::....
  Rat   380 IEVLFNSYTQLRVSESWREAIPEEVYQMHKPFYRSLFALAHTPRCLQHFCRCAIRKLFGKECIHL 444

  Fly   653 INCLNLPGPLKDYVL 667
            :..|.||..|::|:|
  Rat   445 VPQLPLPETLQNYLL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13933NP_647658.1 ANKYR <67..250 CDD:440430 13/51 (25%)
ANK repeat 69..98 CDD:293786
ANK repeat 99..130 CDD:293786
ANK repeat 165..190 CDD:293786
ANKYR 179..>448 CDD:440430 63/267 (24%)
ANK repeat 234..260 CDD:293786 5/25 (20%)
ANK repeat 262..302 CDD:293786 13/49 (27%)
ANK repeat 304..349 CDD:293786 10/44 (23%)
ANKYR <372..>535 CDD:440430 38/196 (19%)
ANK repeat 390..434 CDD:293786 10/49 (20%)
SOCS_box 630..667 CDD:462192 11/36 (31%)
Asb18NP_001101701.1 ANKYR <119..336 CDD:440430 58/280 (21%)
ANK repeat 122..149 CDD:293786 10/42 (24%)
ANK repeat 151..182 CDD:293786 10/37 (27%)
ANK repeat 184..214 CDD:293786 10/45 (22%)
ANK repeat 218..249 CDD:293786 5/35 (14%)
PTZ00322 283..>366 CDD:140343 21/110 (19%)
ANK repeat 293..324 CDD:293786 7/30 (23%)
ANK repeat 326..357 CDD:293786 8/45 (18%)
SOCS_ASB4_ASB18 420..467 CDD:239693 12/40 (30%)
Blue background indicates that the domain is not in the aligned region.

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