| Sequence 1: | NP_001261283.1 | Gene: | CG8001 / 38224 | FlyBaseID: | FBgn0035268 | Length: | 748 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_010136.1 | Gene: | COP1 / 851410 | SGDID: | S000002304 | Length: | 1201 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 478 | Identity: | 101/478 - (21%) |
|---|---|---|---|
| Similarity: | 170/478 - (35%) | Gaps: | 107/478 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 273 WNYDQ-ELLQR--EH-NIINRIDWRGGHTSASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLN 333
Fly 334 FNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVR-- 396
Fly 397 -------RSVIPPSGGVIKPIRLYTH------SESVHKIIVVPHSR-------HE----LMSAGE 437
Fly 438 DAAVKHFDLRASNAATTMMRCVYNDENERGRV-RLFSIAHHPYAPEFCVSGSDDILRVY--DKRN 499
Fly 500 LAKAIHQMAPRNLLEAQITQITCAVYNHSGSEILASYSDAGIYLFDSRNYNRGDYLHCYKGHINS 564
Fly 565 RTIKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVGVVNCLEPHPW--MPVLATSG 627
Fly 628 LEHDVKIWTPQG-------PERKLPEDLLKQTLQRNFRCNIVESIDLDINNFQYFIRGFLQGSGA 685
Fly 686 SHLRQRHTSSLGHQMRDNSSSRS 708 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG8001 | NP_001261283.1 | WD40 | <317..653 | CDD:225201 | 80/373 (21%) |
| WD40 | 318..635 | CDD:295369 | 76/347 (22%) | ||
| WD40 repeat | 331..367 | CDD:293791 | 12/35 (34%) | ||
| WD40 repeat | 373..414 | CDD:293791 | 9/49 (18%) | ||
| WD40 repeat | 419..462 | CDD:293791 | 12/53 (23%) | ||
| WD40 repeat | 472..513 | CDD:293791 | 13/42 (31%) | ||
| WD40 repeat | 520..559 | CDD:293791 | 6/38 (16%) | ||
| WD40 repeat | 567..594 | CDD:293791 | 5/26 (19%) | ||
| WD40 repeat | 611..657 | CDD:293791 | 9/54 (17%) | ||
| COP1 | NP_010136.1 | WD40 | 17..322 | CDD:238121 | 71/304 (23%) |
| WD40 repeat | 17..51 | CDD:293791 | 5/12 (42%) | ||
| WD40 repeat | 59..93 | CDD:293791 | 6/33 (18%) | ||
| WD40 repeat | 99..135 | CDD:293791 | 12/36 (33%) | ||
| WD40 repeat | 140..206 | CDD:293791 | 12/67 (18%) | ||
| WD40 repeat | 213..250 | CDD:293791 | 7/44 (16%) | ||
| WD40 repeat | 256..292 | CDD:293791 | 12/35 (34%) | ||
| Coatomer_WDAD | 343..770 | CDD:397941 | 26/141 (18%) | ||
| COPI_C | 829..1199 | CDD:399736 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||