Protein Alignment CG8001 and AT4G38480

DIOPT Version :10

• Sequence 1: NP_647657.1
• Gene: CG8001 / 38224
• FlyBaseID: FBgn0035268
• Length: 748
• Species: Drosophila melanogaster
• Sequence 2: NP_568042.1
• Gene: AT4G38480 / 830004
• AraportID: AT4G38480
• Length: 471
• Species: Arabidopsis thaliana
• Alignment Length: 524
• Identity: 175/524 - (33%)
• Similarity: 235/524 - (44%)
• Gaps: 108/524 - (20%)

  Fly   250 PADREKVDYAVNQVMCKCKPKYTWNYDQELLQREHNIINRIDWRGGHTSASSFGQGYYGSRQVVE 314
            ||.|.:.|::|..|         |..:..||.      ||           ||...:..|..::.
plant     5 PAKRPRTDHSVVNV---------WERELGLLP------NR-----------SFSNRFSASEDLLR 43

  Fly   315 QMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQTKFID 379
            ::.|...|:.|.||||:::||..||::.|||||..:::|||........|.|||..||||.||:.
plant    44 RLGLDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108

  Fly   380 SAGCLDIVSSSRDGQVRRSVIPPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSAGEDAAVKHF 444
            .:....||:|:.|.|||.|.|..||.|...: |..|...|||:.|.|.|.....:.|||.|||||
plant   109 FSDDRTIVTSAADKQVRYSKILESGQVETSL-LGKHQGPVHKLAVEPGSPFSFYTCGEDGAVKHF 172

  Fly   445 DLRASNAATTMMRC--------VYNDENERGRVRLFSIAHHPYAPE-FCVSGSDDILRVYDKR-- 498
            ||| :..||.:..|        ||          |.:||..|..|. ..|:|.|:..||||.|
plant   173 DLR-TRVATNLFTCKEAKFNLVVY----------LHAIAVDPRNPGLLAVAGMDEYARVYDIRSY 226

  Fly   499 ------NLAKAIHQMAPRNLLEAQITQITCAVYNHSGSEILASYSDAGIYLF------------D 545
                  |..:.|....|.:|:......||...::.. ||:||||||..||||            .
plant   227 RSEGWYNFTQPIDHFCPGHLIGDDHVGITGLAFSDQ-SELLASYSDEFIYLFTPDMGLGPTPYPS 290

  Fly   546 SRNYNRGDYLHCYKGHINSRTIKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVGV 610
            |...........||.|.|..|:||||||||:.||:|||||||.||.|.|....::..|:.|. .|
plant   291 STKTEERMTPQVYKEHTNRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADR-HV 354

  Fly   611 VNCLEPHPWMPVLATSGLEHDVKIWTPQGPERKLPEDLLKQTLQRNFRCNIVESIDLDINNFQYF 675
            |||:|.||.||::.:||::.|:|||||.|.|:.|.....||.              ....|.::|
plant   355 VNCIESHPHMPLMCSSGIDTDIKIWTPGGTEKPLSPGNAKQA--------------SGFGNPRWF 405

  Fly   676 IRGFLQGSGASHLRQRHTSSLGHQMRDNSSSRSNGSNASNPTSHRRNSN-------SSDDTNDEG 733
            ...::...                  |:|...|:..::.:..|.....|       :.||.||.|
plant   406 DGYYVDDD------------------DDSDDESSEESSDDDDSSEEEENGEVDVEITKDDDNDHG 452

  Fly   734 ADAD 737
            .|.|
plant   453 DDDD 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8001	NP_647657.1	WD40	318..635	CDD:475233	138/345 (40%)
		WD40 repeat	331..367	CDD:293791	13/35 (37%)
		WD40 repeat	373..414	CDD:293791	17/40 (43%)
		WD40 repeat	419..462	CDD:293791	22/50 (44%)
		WD40 repeat	472..513	CDD:293791	15/49 (31%)
		WD40 repeat	520..559	CDD:293791	15/50 (30%)
		WD40 repeat	567..594	CDD:293791	20/26 (77%)
		WD40 repeat	611..657	CDD:293791	21/45 (47%)
AT4G38480	NP_568042.1	WD40	51..379	CDD:475233	137/341 (40%)
		WD40 repeat	60..96	CDD:293791	13/35 (37%)
		WD40 repeat	102..141	CDD:293791	16/39 (41%)
		WD40 repeat	147..186	CDD:293791	19/39 (49%)
		WD40 repeat	194..247	CDD:293791	18/62 (29%)
		WD40 repeat	254..304	CDD:293791	15/50 (30%)
		WD40 repeat	355..379	CDD:293791	12/23 (52%)