DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8001 and Dcaf6

DIOPT Version :10

Sequence 1:NP_647657.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:XP_036009808.1 Gene:Dcaf6 / 74106 MGIID:1921356 Length:968 Species:Mus musculus


Alignment Length:344 Identity:60/344 - (17%)
Similarity:121/344 - (35%) Gaps:106/344 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EESRNLLNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSG-----------QLLTVRELCTV 141
            ::|.:||...:|..:...:::.:......:|....:||:.|||           ||...:|||.|
Mouse    40 KDSGSLLKIQNAVYSYKRLIQLKNGHCKVLQGKLQVVEKEVSGLRKKLTDAEREQLEQEQELCNV 104

  Fly   142 RSTL----------------------------TAATSTFQKL----RKAAIS----DNRVTPLVD 170
            |.||                            .......|||    |:..:.    .|.:..:::
Mouse   105 RFTLKQEEEKRKNVDWIYNKIKEQLREKEEQYNKEVKARQKLEIRIRELDVEMKTVRNNLNKVLE 169

  Fly   171 ----------------ILQ---------------------GCDFKDTLQQK--ISFCI----DCN 192
                            |||                     ....::.|:|:  .|.|.    ||.
Mouse   170 ERNCMERQLLQEQKARILQDGILASHLHKQKELKLAQEKISSQLQEALEQRRQPSQCATKMQDCV 234

  Fly   193 MTMILDRASEDLEIIRSERRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSRMCVAIRATHKS 257
            ..:.|:.     .::::..|:..|.::.|.|.:.:: |||....:..:.:.|.:...::| |...
Mouse   235 QKLGLEN-----HMLKATARKQAEKIEQLKKNLLSE-FLAQAAYEDKLEKLRHKQNASVR-TQME 292

  Fly   258 LLPGGVVLSVSSSRATCFIEPKEAVELNNMEVRHANSEKAEEMAILSILTSEVVMAQREILHLLD 322
            |.    :..:.|.    |.:.|..|:.|.:|:.:......||:.|...|::::......:..:..
Mouse   293 LR----IRDLESE----FSKMKSQVDCNQIEMENYKQLYLEEVKIRKSLSNKLSKTDERLAEVKT 349

  Fly   323 RILELDIAFARASHANWIN 341
            ::| |:....|||..:.::
Mouse   350 KLL-LERKQNRASQYSMVD 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_647657.1 WD40 318..635 CDD:475233 5/24 (21%)
WD40 repeat 331..367 CDD:293791 3/11 (27%)
WD40 repeat 373..414 CDD:293791
WD40 repeat 419..462 CDD:293791
WD40 repeat 472..513 CDD:293791
WD40 repeat 520..559 CDD:293791
WD40 repeat 567..594 CDD:293791
WD40 repeat 611..657 CDD:293791
Dcaf6XP_036009808.1 WD40 43..>292 CDD:475233 43/255 (17%)
WD40 repeat 55..92 CDD:293791 6/36 (17%)
WD40 repeat 97..138 CDD:293791 7/40 (18%)
WD40 repeat 148..181 CDD:293791 2/32 (6%)
WD40 repeat 188..233 CDD:293791 5/44 (11%)
WD40 repeat 256..282 CDD:293791 6/26 (23%)
WD40 <838..897 CDD:475233
Blue background indicates that the domain is not in the aligned region.

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