DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8001 and DCAF6

DIOPT Version :9

Sequence 1:NP_001261283.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_001185885.1 Gene:DCAF6 / 55827 HGNCID:30002 Length:951 Species:Homo sapiens


Alignment Length:551 Identity:125/551 - (22%)
Similarity:197/551 - (35%) Gaps:164/551 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 YYGSRQVVEQMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNM 370
            |.|.|:.::::.|.::||||.||||::.:|..|:.|.|||||..:|:.:....|.|...||||..
Human    31 YLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRA 95

  Fly   371 NIFQTKFIDSAGCLDIVSSSRDGQVRRSVIPPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSA 435
            |||..||:.......|||.|.||.:..:.:.......:..:...|..:.::|:.||:..:..:|.
Human    96 NIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSC 160

  Fly   436 GEDAAVKHFDLRASNAAT-------TMMRCVYNDENERGRVRLFSIAHHPYAPEFCVSG-SDDIL 492
            |||..|:.||.|...:.|       .::.|         |....|:|..|..|.:...| ||..:
Human   161 GEDGTVRWFDTRIKTSCTKEDCKDDILINC---------RRAATSVAICPPIPYYLAVGCSDSSV 216

  Fly   493 RVYDKRNL-AKAIHQMAPRNL-----------LEAQITQITCAVYNHSGSEILASYSDAGIYLFD 545
            |:||:|.| .:|....|.|..           |..:..::|...|:..|.|||.|||...|||||
Human   217 RIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKSCRVTSLCYSEDGQEILVSYSSDYIYLFD 281

  Fly   546 SRNYN--------------------------RGDYLHCYKGHINSRTIKGVNFFGPR----SEYI 580
            .::..                          |||:         |.|       |||    ||..
Human   282 PKDDTARELKTPSAEERREELRQPPVKRLRLRGDW---------SDT-------GPRARPESERE 330

  Fly   581 VSGSDCGNIFFWDKNTEAIINYMK-------------------GDHVGVVNCLEPHPWMPVLATS 626
            ..|....|:....:.::.:..:.:                   |.....::.|...|..|.|..|
Human   331 RDGEQSPNVSLMQRMSDMLSRWFEEASEVAQSNRGRGRSRPRGGTSQSDISTLPTVPSSPDLEVS 395

  Fly   627 GLEHDVKIWTP----------------------------QGPERKLPEDLLKQTLQRNFRCNIVE 663
              |..:::.||                            ..|....|:...:|:::.:       
Human   396 --ETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPTESPHSTPLLSSPDSEQRQSVEAS------- 451

  Fly   664 SIDLDINNFQYFIRGFLQGSGASHLR-------------QRHTSSLGHQMRDNSSSRSNGSNASN 715
                  .:..:....||:|...:.||             ||......|..:..|:|..:....|:
Human   452 ------GHHTHHQSEFLRGPEIALLRKRLQQLRLKKAEQQRQQELAAHTQQQPSTSDQSSHEGSS 510

  Fly   716 PTSHRRNSNSS--------------DDTNDE 732
            ...|..:|.||              .|.|:|
Human   511 QDPHASDSPSSVVNKQLGSMSLDEQQDNNNE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_001261283.1 WD40 <317..653 CDD:225201 104/432 (24%)
WD40 318..635 CDD:295369 99/385 (26%)
WD40 repeat 331..367 CDD:293791 12/35 (34%)
WD40 repeat 373..414 CDD:293791 9/40 (23%)
WD40 repeat 419..462 CDD:293791 13/49 (27%)
WD40 repeat 472..513 CDD:293791 15/53 (28%)
WD40 repeat 520..559 CDD:293791 17/64 (27%)
WD40 repeat 567..594 CDD:293791 7/30 (23%)
WD40 repeat 611..657 CDD:293791 11/73 (15%)
DCAF6NP_001185885.1 WD40 <42..>281 CDD:225201 78/247 (32%)
WD40 43..>292 CDD:295369 80/257 (31%)
WD 1 49..88 17/38 (45%)
WD40 repeat 55..92 CDD:293791 13/36 (36%)
WD 2 92..133 13/40 (33%)
WD40 repeat 97..138 CDD:293791 10/40 (25%)
WD 3 139..179 12/39 (31%)
WD40 repeat 148..181 CDD:293791 11/32 (34%)
WD40 repeat 188..233 CDD:293791 15/53 (28%)
WD 4 189..229 14/48 (29%)
WD 5 251..290 14/38 (37%)
WD40 repeat 256..282 CDD:293791 13/25 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..340 12/67 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..392 4/36 (11%)
WD40 <821..880 CDD:295369
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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