DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8001 and LOC4576503

DIOPT Version :10

Sequence 1:NP_647657.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:XP_557020.3 Gene:LOC4576503 / 4576503 VectorBaseID:AGAMI1_008408 Length:764 Species:Anopheles gambiae


Alignment Length:734 Identity:229/734 - (31%)
Similarity:342/734 - (46%) Gaps:142/734 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASGAASACKRQKRNTDSQNDGEPE-DAAQIGEENTVAESQPLINFDTIV---------------- 55
            ||.|.:|....:..|.|::....| :|:...:|:...:.....:.:..|                
Mosquito    97 ASAAPAAAANVRSRTPSRDRNAAERNASSSSDEDAAVDDAYFHHLEQSVRRLVHRNVRNLGSLRS 161

  Fly    56 THNNNGESDMEGKENQLQDESEQSE-----EHLANKVGPEELPEIEQAGSSNLAHQLSPEAASTV 115
            ...|:|:...:|..|...|::|...     :|       .|...|....:.|:|..|:|      
Mosquito   162 RQRNDGDEGADGAANAAADDNEAGSGSDGGDH-------REQIRIRNQLADNIAELLAP------ 213

  Fly   116 LASDEPDASTGVIEPSDSEDYPPTSPTPIEASEAVSSPRFNPRNIPPTRSYRRISIELVGSYSDT 180
                      |.: |::.| |  .:|:.::::||                             |.
Mosquito   214 ----------GFL-PNELE-Y--ETPSEVDSAEA-----------------------------DL 235

  Fly   181 SDSEEHE-----LEE-----GTEHAEEYSDDAPEPHIAESADDSSSNDDMGPYSLSSEDETTTEV 235
            .|.|::.     |:.     |.|.....|.|:....::.::..|||.|....|..|||       
Mosquito   236 YDDEDNNWPAGGLQRRRRLFGMEEVNHLSSDSSRSSLSSASTASSSTDGSESYIQSSE------- 293

  Fly   236 ENLQDEVEFNEDINPADREKVDYAVNQVMC------KCKPKYTWNYDQELLQREHNI-INRIDWR 293
               .|.|...|   |:|  :.|..|:.:.|      |||    ||..:|:.||:|.| .:|....
Mosquito   294 ---SDFVSIQE---PSD--QCDENVHNLECLQTSSVKCK----WNIVREISQRQHGIAFHRPPAT 346

  Fly   294 GGHTSASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIVVWDWAKE 358
            .|..:...|....|||..:|:::.||..|..|.||||||||:.:|.|:.||||||.|.:|.|..:
Mosquito   347 VGRYNPIQFQTRAYGSVHLVQRLGLLHKLAHHTGCVNSLNFHPSGKLLASGSDDLRINLWHWESK 411

  Fly   359 KQLHRFRSGHNMNIFQTKFIDSAGC---LDIVSSSRDGQVRRSVIPPSGGVIKPIRLYTHSESVH 420
            |.|...||||..|:|||||:...|.   ::|:|:.|||.||.:.:...|..:..: ::.....:|
Mosquito   412 KLLKSIRSGHKNNVFQTKFMTCDGYGSEIEIISTGRDGHVRHTTVKSCGQAVTKV-IFRSQHPIH 475

  Fly   421 KIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTMMRCVYNDENERGRVRLFSIAHHPYAPEFCV 485
            |:.:...:....:.||||..|:..|:|.:...|.:         :.| :||:|||.|||..||||
Mosquito   476 KVAIPARNDLTFLMAGEDEKVRLCDMRQAKMQTVV---------DVG-LRLYSIATHPYDTEFCV 530

  Fly   486 SGSDDILRVYDKRNLAKAIHQMAPRNLLEA--QITQITCAVYNHSGSEILASYSDAGIYLFDSRN 548
            |||...:||||.|...|.:..:......|.  ..:.||||||||.|:||||||||..||||....
Mosquito   531 SGSGSAVRVYDLRRAQKPLRMLFVGEQGEGLRSYSSITCAVYNHDGTEILASYSDDDIYLFKLAE 595

  Fly   549 YNRGDYL--HCYKGHINSRTIKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVGVV 611
            ......:  ..::||.|.:|||||:|||||||::|||||||.::.|:|::..|:|:::.:...||
Mosquito   596 AEAEMVIPTERFRGHCNVQTIKGVSFFGPRSEFVVSGSDCGYVYIWEKSSRRIVNWLRSNPGEVV 660

  Fly   612 NCLEPHPWMPVLATSGLEHDVKIWTPQG--PERKLP----EDLLKQTLQRNFRCNIVESIDLDI- 669
            |||||||..|:|||||:::|:|:|.|:|  .|:..|    .| ||:.::||.........|..| 
Mosquito   661 NCLEPHPAFPILATSGVDNDIKVWVPKGLRDEQTAPVFEWND-LKRYVRRNVHSRTQHRNDFSIR 724

  Fly   670 --NNFQYFIRGFLQGSGAS 686
              :|.......|..|..||
Mosquito   725 SASNLSRIFPAFAYGPRAS 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_647657.1 WD40 318..635 CDD:475233 141/323 (44%)
WD40 repeat 331..367 CDD:293791 18/35 (51%)
WD40 repeat 373..414 CDD:293791 14/43 (33%)
WD40 repeat 419..462 CDD:293791 10/42 (24%)
WD40 repeat 472..513 CDD:293791 19/40 (48%)
WD40 repeat 520..559 CDD:293791 21/40 (53%)
WD40 repeat 567..594 CDD:293791 19/26 (73%)
WD40 repeat 611..657 CDD:293791 25/51 (49%)
LOC4576503XP_557020.3 WD40 <366..684 CDD:441893 142/328 (43%)
WD40 repeat 384..420 CDD:293791 18/35 (51%)
WD40 repeat 426..468 CDD:293791 14/42 (33%)
WD40 repeat 473..511 CDD:293791 10/46 (22%)
WD40 repeat 517..554 CDD:293791 19/36 (53%)
WD40 repeat 567..608 CDD:293791 21/40 (53%)
WD40 repeat 616..653 CDD:293791 22/36 (61%)
WD40 repeat 660..684 CDD:293791 16/23 (70%)

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