DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8001 and adp

DIOPT Version :10

Sequence 1:NP_647657.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_611296.2 Gene:adp / 37073 FlyBaseID:FBgn0000057 Length:628 Species:Drosophila melanogaster


Alignment Length:594 Identity:120/594 - (20%)
Similarity:192/594 - (32%) Gaps:242/594 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 YTWNYDQELLQREHNIIN--RIDWRG---GHTSASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVN 330
            |...|.....||:|..:|  .:.|:.   ||.......:....|...|:::...:.|..|.||||
  Fly     7 YRVKYSSSRYQRQHTPLNASSLHWQRQQYGHELDEMLRRRLLASPAYVDRLEQEAVLVGHEGCVN 71

  Fly   331 SLNFNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQV 395
            .|.:...|..:.|||||..:::||..::|.:|..|:.|..|:|..||:.......:.:.:.|..:
  Fly    72 CLEWTTDGMWLASGSDDYRVMIWDPFRKKLVHVIRTKHLGNVFSVKFLPKTNNSIVATCAADKFI 136

  Fly   396 R-RSVIPPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTMMRCV 459
            . ..:..|:..:...|   .|.....::.....|.|...|||||..:...|:|..:      || 
  Fly   137 YVYDINDPNETLFSCI---CHFSRAKRLATAQDSPHVFWSAGEDGCILQLDIREPH------RC- 191

  Fly   460 YNDENERG-RVRLFS------------IAHHPYAPEFCVSGSDD-ILRVYDKR--------NLAK 502
               ..|.| .|||.:            :|.:|...|:...|::| ..||||:|        .|:.
  Fly   192 ---RPEEGIGVRLLNLHDQLENTEAKCLAINPRRTEYLAVGTNDPFARVYDRRKLPSTNGNGLSA 253

  Fly   503 AIHQMAP--------RNLLEAQITQITCAVYNHSGSEILASYSDAGIYLFD-------------- 545
            .:...||        ||::. :...||...:|.:|:|:|.:.....:|.||              
  Fly   254 CVAYYAPGQIVKNISRNIVH-EPRGITYLTFNGNGTELLVNIGCEHVYRFDLNHAEPPVFYDLPA 317

  Fly   546 -----------------SRN----------------------------------YNRG------- 552
                             ||:                                  |.:|       
  Fly   318 FTSTLVHEEEPVKMPHRSRSLPTEIEVYKKEGNDFLENGKLVDAIDAYSAALAKYPQGEVLYLNR 382

  Fly   553 ----------------------------------------------------------------- 552
                                                                             
  Fly   383 ATALMRRGWFGDIYAALRDCHEALRLDPSYVKAHFRLARALLELHRPQDADQCLQALIQRFPDFA 447

  Fly   553 -----------------------------------------------------DYLHCYKGHINS 564
                                                                 ||:..|.||.|.
  Fly   448 NNHGVLMLNKDIKENRRQSKSPEAPELQPVEVDDGFRYLRLKNAEYDLRSTARDYMQRYVGHCNV 512

  Fly   565 RT-IKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVGVVNCLEPHPWMPVLATSGL 628
            .| ||..|:.|.:.|:|.:|||.||::.|:.:|..|....:.|. .:|||::|||.:.:|||||:
  Fly   513 TTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGKIRAVYRADS-AIVNCVQPHPSICMLATSGI 576

  Fly   629 EHDVKIWTP 637
            :|::|||:|
  Fly   577 DHNIKIWSP 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_647657.1 WD40 318..635 CDD:475233 106/538 (20%)
WD40 repeat 331..367 CDD:293791 12/35 (34%)
WD40 repeat 373..414 CDD:293791 6/41 (15%)
WD40 repeat 419..462 CDD:293791 11/42 (26%)
WD40 repeat 472..513 CDD:293791 15/69 (22%)
WD40 repeat 520..559 CDD:293791 15/228 (7%)
WD40 repeat 567..594 CDD:293791 12/26 (46%)
WD40 repeat 611..657 CDD:293791 16/27 (59%)
adpNP_611296.2 WD40 54..>242 CDD:475233 53/200 (27%)
WD40 repeat 72..108 CDD:293791 12/35 (34%)
WD40 repeat 114..154 CDD:293791 6/42 (14%)
WD40 repeat 158..203 CDD:293791 16/54 (30%)
WD40 repeat 214..268 CDD:293791 13/53 (25%)
Spy 338..>461 CDD:443119 2/122 (2%)
TPR repeat 342..370 CDD:276809 0/27 (0%)
TPR repeat 375..408 CDD:276809 1/32 (3%)
TPR repeat 413..441 CDD:276809 0/27 (0%)
WD40 repeat 513..553 CDD:293791 15/39 (38%)
WD40 <526..584 CDD:475233 25/58 (43%)

Return to query results.
Submit another query.