DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8001 and adp

DIOPT Version :9

Sequence 1:NP_001261283.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_001286563.1 Gene:adp / 37073 FlyBaseID:FBgn0000057 Length:628 Species:Drosophila melanogaster


Alignment Length:606 Identity:121/606 - (19%)
Similarity:190/606 - (31%) Gaps:266/606 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 YTWNYDQELLQREHNIIN--RIDWRG---GHTSASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVN 330
            |...|.....||:|..:|  .:.|:.   ||.......:....|...|:::...:.|..|.||||
  Fly     7 YRVKYSSSRYQRQHTPLNASSLHWQRQQYGHELDEMLRRRLLASPAYVDRLEQEAVLVGHEGCVN 71

  Fly   331 SLNFNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQV 395
            .|.:...|..:.|||||..:::||..::|.:|..|:.|..|:|..||:.......:.:.:.|   
  Fly    72 CLEWTTDGMWLASGSDDYRVMIWDPFRKKLVHVIRTKHLGNVFSVKFLPKTNNSIVATCAAD--- 133

  Fly   396 RRSVIPPSGGVIKPIRLY-------------THSESVHKIIVVPHSRHELMSAGEDAAVKHFDLR 447
                        |.|.:|             .|.....::.....|.|...|||||..:...|:|
  Fly   134 ------------KFIYVYDINDPNETLFSCICHFSRAKRLATAQDSPHVFWSAGEDGCILQLDIR 186

  Fly   448 ASNAATTMMRCVYNDENERG-RVRLFS------------IAHHPYAPEFCVSGSDD-ILRVYDKR 498
            ..:      ||    ..|.| .|||.:            :|.:|...|:...|::| ..||||:|
  Fly   187 EPH------RC----RPEEGIGVRLLNLHDQLENTEAKCLAINPRRTEYLAVGTNDPFARVYDRR 241

  Fly   499 --------NLAKAIHQMAP--------RNLLEAQITQITCAVYNHSGSEILASYSDAGIYLFD-- 545
                    .|:..:...||        ||::. :...||...:|.:|:|:|.:.....:|.||  
  Fly   242 KLPSTNGNGLSACVAYYAPGQIVKNISRNIVH-EPRGITYLTFNGNGTELLVNIGCEHVYRFDLN 305

  Fly   546 -----------------------------SRN--------------------------------- 548
                                         ||:                                 
  Fly   306 HAEPPVFYDLPAFTSTLVHEEEPVKMPHRSRSLPTEIEVYKKEGNDFLENGKLVDAIDAYSAALA 370

  Fly   549 -YNRG------------------------------------------------------------ 552
             |.:|                                                            
  Fly   371 KYPQGEVLYLNRATALMRRGWFGDIYAALRDCHEALRLDPSYVKAHFRLARALLELHRPQDADQC 435

  Fly   553 ----------------------------------------------------------------- 552
                                                                             
  Fly   436 LQALIQRFPDFANNHGVLMLNKDIKENRRQSKSPEAPELQPVEVDDGFRYLRLKNAEYDLRSTAR 500

  Fly   553 DYLHCYKGHINSRT-IKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVGVVNCLEP 616
            ||:..|.||.|..| ||..|:.|.:.|:|.:|||.||::.|:.:|..|....:.|. .:|||::|
  Fly   501 DYMQRYVGHCNVTTDIKEANYLGSQGEFIAAGSDDGNMYIWEGDTGKIRAVYRADS-AIVNCVQP 564

  Fly   617 HPWMPVLATSGLEHDVKIWTP 637
            ||.:.:|||||::|::|||:|
  Fly   565 HPSICMLATSGIDHNIKIWSP 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_001261283.1 WD40 <317..653 CDD:225201 110/555 (20%)
WD40 318..635 CDD:295369 107/550 (19%)
WD40 repeat 331..367 CDD:293791 12/35 (34%)
WD40 repeat 373..414 CDD:293791 7/53 (13%)
WD40 repeat 419..462 CDD:293791 11/42 (26%)
WD40 repeat 472..513 CDD:293791 15/69 (22%)
WD40 repeat 520..559 CDD:293791 15/228 (7%)
WD40 repeat 567..594 CDD:293791 12/26 (46%)
WD40 repeat 611..657 CDD:293791 16/27 (59%)
adpNP_001286563.1 WD40 54..>242 CDD:295369 54/212 (25%)
WD40 59..>242 CDD:225201 53/207 (26%)
WD40 repeat 72..108 CDD:293791 12/35 (34%)
WD40 repeat 114..154 CDD:293791 7/54 (13%)
WD40 repeat 158..203 CDD:293791 16/54 (30%)
WD40 repeat 214..268 CDD:293791 13/53 (25%)
TPR_11 341..410 CDD:290150 2/68 (3%)
TPR repeat 342..370 CDD:276809 0/27 (0%)
TPR repeat 375..408 CDD:276809 1/32 (3%)
TPR_11 378..444 CDD:290150 0/65 (0%)
TPR repeat 413..441 CDD:276809 0/27 (0%)
TPR_6 415..445 CDD:289917 0/29 (0%)
WD40 repeat 513..553 CDD:293791 15/39 (38%)
WD40 <524..>584 CDD:225201 25/60 (42%)
WD40 <526..584 CDD:295369 25/58 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448286
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1334
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR15574
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R616
SonicParanoid 00.000 Not matched by this tool.
65.880

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