DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8001 and adpr-1

DIOPT Version :9

Sequence 1:NP_001261283.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_001021829.1 Gene:adpr-1 / 3565128 WormBaseID:WBGene00044440 Length:558 Species:Caenorhabditis elegans


Alignment Length:571 Identity:116/571 - (20%)
Similarity:190/571 - (33%) Gaps:220/571 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 QVVEQMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQT 375
            ::|:.:.....|..|.||||:|.:|:.|.|:.|||||..:.:|...:|  :|...:||..|:|..
 Worm    26 RLVDSLESFHMLEGHSGCVNTLRWNKTGALLASGSDDRNVKIWKSGRE--IHNLVTGHEGNVFAV 88

  Fly   376 KFIDSAGCLDIVSSSRDGQVRRSVIPPSGGVIKPIRLYTHSESVHKIIVVPHSRHELMSAGE-DA 439
            :|:.::|...:|:.:.|..|....|..|     ..:.:.....|.:|..|.|......:|.| |.
 Worm    89 EFLQNSGDQKLVTGAADRVVALHDIEAS-----TCKKWELDGRVKRICTVEHDPTLFWAAVECDN 148

  Fly   440 AVKHFDLRASNAATTMMRCV---YNDENERGRVRLFSIAHHPYAPEFCVSGSDD-ILRVYDKRNL 500
            .|:.||.|..|....:....   ::|..        |:|.....|...|.|.|: .:|:||:|||
 Worm   149 GVQQFDTRTENPEVIIRHTADREFHDAK--------SVAVSEARPNLIVVGFDETAVRLYDRRNL 205

  Fly   501 AKAIHQMAP--RNLLEAQITQITCAVYNHSGSEILASY-SDAGIYLF------------------ 544
            ...:...:|  .|......|.:   .:|..|:|::.:: ...|:|:|                  
 Worm   206 NAPMLTFSPLGANTYAYHATHV---AFNKRGTEVVVNHGGGGGVYVFSVDAELDPKYMDRFHSVM 267

  Fly   545 ----------------------------------------------------DSRNY-------- 549
                                                                |.|.:        
 Worm   268 ELPREPVITSGALPYPDLREIGSTAIREKHFAKAIDFYSDLIYRNDDRESHQDHRAFLSVCHSNR 332

  Fly   550 --------NRGDYLHC------------------------------------------------- 557
                    .|||...|                                                 
 Worm   333 ATALLLRRQRGDTYACVRDCIKALEIHRGNSKALLRLIKSFTTMEHIGLARKCVQKFKEWYPNDT 397

  Fly   558 --------------------------------YKGHINSRT-IKGVNFFGPRSEYIVSGSDCGNI 589
                                            |.|..|.:| ||..||||.|.:||::|||||::
 Worm   398 AIEKMEEDVEALTPNDRPELVAPEGVVDYQERYGGSTNHQTDIKEANFFGSRDQYIIAGSDCGHM 462

  Fly   590 FFWDKNTEAIINYMKG-DHVGVVNCLEPHPWMPVLATSGLEHDVKIWTPQGPERKLPEDLLKQTL 653
            :.|:::|..|....:. ||  ::|..:|||...::||:|::.|:.:|.|. .||  |:..|.:.:
 Worm   463 YIWNRDTSKIQGIFEADDH--ILNICQPHPDQFMIATAGIDDDILLWQPI-LER--PDAFLSRRV 522

  Fly   654 QRNFRCNIVESIDLDINNFQYFIRGFLQGSGASHLRQRHTSSLGHQMRDNS 704
            :..:.                |:.....|.|.    :.|...|....||||
 Worm   523 EDPYE----------------FMEKRADGMGG----RIHLHMLRDLARDNS 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_001261283.1 WD40 <317..653 CDD:225201 106/512 (21%)
WD40 318..635 CDD:295369 100/493 (20%)
WD40 repeat 331..367 CDD:293791 12/35 (34%)
WD40 repeat 373..414 CDD:293791 8/40 (20%)
WD40 repeat 419..462 CDD:293791 12/46 (26%)
WD40 repeat 472..513 CDD:293791 14/43 (33%)
WD40 repeat 520..559 CDD:293791 12/206 (6%)
WD40 repeat 567..594 CDD:293791 15/26 (58%)
WD40 repeat 611..657 CDD:293791 14/45 (31%)
adpr-1NP_001021829.1 WD40 <37..201 CDD:392136 49/178 (28%)
WD40 repeat 45..80 CDD:293791 13/36 (36%)
WD40 repeat 85..124 CDD:293791 8/43 (19%)
WD40 repeat 132..171 CDD:293791 10/38 (26%)
WD40 repeat 178..213 CDD:293791 11/34 (32%)
TPR repeat 285..310 CDD:276809 0/24 (0%)
TPR repeat 315..358 CDD:276809 6/42 (14%)
TPR repeat 363..388 CDD:276809 0/24 (0%)
WD40 <436..>507 CDD:392136 28/72 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R616
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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