DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8001 and iqw1

DIOPT Version :10

Sequence 1:NP_647657.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_596313.1 Gene:iqw1 / 2541121 PomBaseID:SPBC609.03 Length:809 Species:Schizosaccharomyces pombe


Alignment Length:826 Identity:137/826 - (16%)
Similarity:213/826 - (25%) Gaps:435/826 - (52%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 INRIDWRGGHTSASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLNFNRAGDLICSGSDDLTIV 351
            :.::|:|.......|  :..||:...:..:.|...|..|.||||:|:::..|:.:.|||||..::
pombe     8 LRQLDYRDWFQRKIS--RDIYGNSTWLTGIDLQKELTGHTGCVNTLDWSADGEFLLSGSDDTRLI 70

  Fly   352 VWDWAKE-KQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVRRSVIPPS--GGVIKPIRLY 413
            |||...| |..|...:||..|||..||:..:....|:|:|.|..::...:..|  ||:...:...
pombe    71 VWDVFNEYKPRHLISTGHVQNIFSAKFVPYSNNRQILSASGDKLIKLFDLDSSKEGGMDHGMETQ 135

  Fly   414 THS-----ESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTMMRCV-----YNDENERGR 468
            |..     :|| |.||...:.|..:...||...:.:|:|..:.....:.|.     ||..    |
pombe   136 TRCWSCALDSV-KNIVPCDNGHTFLVCSEDGTARQYDIREPHVCNQDLDCPSILVNYNPY----R 195

  Fly   469 VRLFSIAHHPYAP-EFCVSGSDDILRVYDKRNLAKA-----------------IHQMAPRNLLEA 515
            :.|::|...|..| .|.:.|:.....:||:|.:.|:                 :.:.:|.....:
pombe   196 INLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFRDDWTMNTSPEKDCRCVRKFSPDGSCNS 260

  Fly   516 Q---ITQITCAVYNHSG-SEILASYSDAGIYLF----------------DS-------------- 546
            |   ...|||..::.:. :|:|.|::...:|||                ||              
pombe   261 QGILDRYITCCQFSAANPNELLVSWNSDYVYLFHVHEDKSYTPTFNKIEDSNKKPSKPSLLQTQP 325

  Fly   547 ----------------------------------------------------------------- 546
                                                                             
pombe   326 LKRKNYSPWYKNNFGASTPASRVSRNPYTAAQPRKHTFYQMYENIEKFFTTENGGLYESIVSGRL 390

  Fly   547 -----------------RNYN-------------------------------------------- 550
                             .|||                                            
pombe   391 SHFSRSIQYVKDAIYFLENYNYIPDSNGLNHSIRVSALRYWRACVSILALMDDTVSLEPNTIIQA 455

  Fly   551 ----------------------------------RGDYLHC------------------------ 557
                                              |.:::.|                        
pombe   456 GWGWLYDFMNWVTRYLLGISDHWALQMSPPTNVARQNFVLCDPDEPSRVLFSNPSEMIRAFARID 520

  Fly   558 ----------------------------------------------------------------- 557
                                                                             
pombe   521 TNDLSSVRRFFWIHKVLRGCLLLISSDIYWEQFQPWDSSTSDVTSSQRLDDENGFLTLLEPPVNY 585

  Fly   558 ----------------------------------------------------------------- 557
                                                                             
pombe   586 ENEVESSSGENIVSMYTGHSDLNDDDDDYQDEESYSYASDDDDESDEDSDEGPTLLSLRMKKRKA 650

  Fly   558 -------------YKGHINSRTIKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAIINYMKGDHVG 609
                         |.||.|..:||.|||:|...||::||||.|..|.|||...:|:..:.||. .
pombe   651 VEPNVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDS-E 714

  Fly   610 VVNCLEPHPWMPVLATSGLEHDVKIWT-----PQGPERKLPEDLLKQTLQRNFRCNIVESIDLDI 669
            .||.:|.||..|.||.||::..|||:.     |.|             ..||...|..:.|..:.
pombe   715 AVNVIEGHPRCPTLAVSGIDSTVKIFNTENTPPSG-------------CSRNHTSNSYKIIATNE 766

  Fly   670 NNFQYFIRGFLQGSGASHLRQRHTSSL----------GHQMRDNSS 705
            .|.|       |||..|::..|..|.|          ||::.|..:
pombe   767 MNRQ-------QGSRDSYITSRMLSHLAYRAHLDDGFGHEVLDTDA 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_647657.1 WD40 318..635 CDD:475233 113/708 (16%)
WD40 repeat 331..367 CDD:293791 13/36 (36%)
WD40 repeat 373..414 CDD:293791 10/42 (24%)
WD40 repeat 419..462 CDD:293791 11/47 (23%)
WD40 repeat 472..513 CDD:293791 10/58 (17%)
WD40 repeat 520..559 CDD:293791 16/396 (4%)
WD40 repeat 567..594 CDD:293791 15/26 (58%)
WD40 repeat 611..657 CDD:293791 16/50 (32%)
iqw1NP_596313.1 WD40 32..>173 CDD:475233 44/141 (31%)
WD40 repeat 49..87 CDD:293791 14/37 (38%)
WD40 repeat 92..133 CDD:293791 11/40 (28%)
WD40 repeat 139..183 CDD:293791 10/44 (23%)
WD40 repeat 196..230 CDD:293791 9/33 (27%)
WD40 <659..741 CDD:475233 37/82 (45%)
WD40 repeat 679..711 CDD:293791 13/31 (42%)
WD40 repeat 716..742 CDD:293791 13/25 (52%)
WD40 repeat 751..793 CDD:293791 13/48 (27%)

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