DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8001 and Wdtc1

DIOPT Version :10

Sequence 1:NP_647657.1 Gene:CG8001 / 38224 FlyBaseID:FBgn0035268 Length:748 Species:Drosophila melanogaster
Sequence 2:NP_955010.1 Gene:Wdtc1 / 230796 MGIID:2685541 Length:677 Species:Mus musculus


Alignment Length:680 Identity:151/680 - (22%)
Similarity:229/680 - (33%) Gaps:289/680 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 NYDQELLQREHNIINRIDWRGGHTSASSFGQGYYGSRQVVEQMTLLSSLNVHHGCVNSLNFNRAG 338
            |..::|::|:      :..||    |.||.:.|:.:...:.::.|.:.|..|.||||.|.:|..|
Mouse     5 NITRDLIRRQ------VKERG----ALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKG 59

  Fly   339 DLICSGSDDLTIVVWDWAKEKQLHRFRSGHNMNIFQTKFIDSAGCLDIVSSSRDGQVRRSVIPPS 403
            ||:.|||||...:|||....|:|....:||..|||..||:..||...:::.:.|.:|....:.  
Mouse    60 DLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHDLT-- 122

  Fly   404 GGVIKPIRLY-THSESVHKIIVVPHSRHELMSAGEDAAVKHFDLRASNAATTMM----------- 456
              |.:.|.:: .|:..|.:|...|...:...||.||..::.:|||.::..:.::           
Mouse   123 --VKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEYCGPMV 185

  Fly   457 -----------------------------RCVYN------------------------------- 461
                                         |.::|                               
Mouse   186 EAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMRQSPSAGVHTFCDRQKPLPDGAAQYY 250

  Fly   462 ----------DENERGR------------------------VRLFSIAH--HPYA---------- 480
                      |.|.|.|                        |.||.:.:  .||.          
Mouse   251 VAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSV 315

  Fly   481 -----------------------------PEF--CVSGSDD----ILRVYDKRNLAKAIH----- 505
                                         ||.  |:|...:    :.||..:.|.|.|..     
Mouse   316 EVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESKGCISPQVELPPYLERVKQQANEAFACQQWTQA 380

  Fly   506 --------QMAPRNLL------------------------------------------------- 513
                    |.||.|.:                                                 
Mouse   381 IQLYSQAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFEL 445

  Fly   514 --------------------------EAQITQITCAVYNHS-GSEILASYSDAGIYLFDS----- 546
                                      :|....||.|:::.| |.|..|:....|.....|     
Mouse   446 KYVAEALECLDDFKGKFPEQAHSSACDALGRDITAALFSKSDGEEKKAAGGGGGPVRLRSTSRKD 510

  Fly   547 -----------RNYNRGDYLHCYKGHINSRT-IKGVNFFGPRSEYIVSGSDCGNIFFWDKNTEAI 599
                       |:|   ||...|.||.|:.| ||..||||..::|||||||.|:.|.|:|.|..:
Mouse   511 SISEDEMVLRERSY---DYQFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNL 572

  Fly   600 INYMKGDHVGVVNCLEPHPWMPVLATSGLEHDVKIWTPQGPER-----KLPEDL--LKQTLQRNF 657
            :..::||. .:||||:|||....|||||::..|::|.|: ||.     ::.||:  ..|..||..
Mouse   573 VRVLQGDE-SIVNCLQPHPSYCFLATSGIDPVVRLWNPR-PESEDLTGRVVEDMEGASQANQRRM 635

  Fly   658 RCNIVESIDLDINNFQYFIRGFLQ-GSGAS 686
            ..|.:|::.||:.   |.|.|... |:|||
Mouse   636 NANPLEAMLLDMG---YRITGLSSGGAGAS 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8001NP_647657.1 WD40 318..635 CDD:475233 122/575 (21%)
WD40 repeat 331..367 CDD:293791 15/35 (43%)
WD40 repeat 373..414 CDD:293791 9/41 (22%)
WD40 repeat 419..462 CDD:293791 12/123 (10%)
WD40 repeat 472..513 CDD:293791 16/100 (16%)
WD40 repeat 520..559 CDD:293791 13/55 (24%)
WD40 repeat 567..594 CDD:293791 16/26 (62%)
WD40 repeat 611..657 CDD:293791 22/52 (42%)
Wdtc1NP_955010.1 WD40 <39..215 CDD:441893 46/179 (26%)
WD 1 45..84 20/38 (53%)
WD40 repeat 51..88 CDD:293791 16/36 (44%)
WD 2 88..129 13/44 (30%)
WD40 repeat 93..131 CDD:293791 10/41 (24%)
WD 3 132..172 11/39 (28%)
WD40 repeat 138..178 CDD:293791 9/39 (23%)
WD 4 182..222 2/39 (5%)
WD40 repeat 232..271 CDD:293791 4/38 (11%)
WD 5 265..305 6/39 (15%)
Spy 358..>467 CDD:443119 9/108 (8%)
TPR 1 361..394 8/32 (25%)
TPR repeat 365..389 CDD:276809 3/23 (13%)
TPR repeat 394..427 CDD:276809 1/32 (3%)
TPR 2 396..431 0/34 (0%)
TPR repeat 432..456 CDD:276809 0/23 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..509 4/19 (21%)
WD 6 535..575 20/39 (51%)
WD40 repeat 537..577 CDD:293791 19/39 (49%)
WD40 <546..>626 CDD:475233 35/81 (43%)
WD 7 578..617 19/40 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 655..677 4/8 (50%)

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