DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and chia

DIOPT Version :10

Sequence 1:NP_477298.2 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001186489.1 Gene:chia / 548404 XenbaseID:XB-GENE-5868468 Length:482 Species:Xenopus tropicalis


Alignment Length:474 Identity:161/474 - (33%)
Similarity:232/474 - (48%) Gaps:78/474 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLLLASTASSLWASVAARTGPLHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAGLD 81
            |:||...|..|    .|:.|..::  :.||.:.||.|||..|.:..:|.||.||||::|||||:.
 Frog     4 LILLVGLALVL----NAQLGSAYE--LTCYFTNWAQYRPGLGKFKPDNIDPCLCTHLIYAFAGMS 62

  Fly    82 ITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLRGR 146
            ..|  |.::: |.|:..      |.....||..:.:||..|||||||.|:|.::.:||....|..
 Frog    63 NNQ--ITTIE-WNDVTL------YSSFQNLKNQNGNLKTLLAIGGWNFGTAPFTAMVATAQSRQT 118

  Fly   147 FVKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADRENFVLLTKELREEFDEHG-------LLLTSA 204
            |:..|..|:|:|.|||||.|||||..|...|.|::.|..|.:|:...|:...       |::|:|
 Frog   119 FISSVIKFLRQYGFDGLDFDWEYPGSRGSPPQDKQLFTTLVQEMLAAFEAEASQSNKPRLMVTAA 183

  Fly   205 IGASKKVIDEAYDVRQISRYLDYLHIMCYDYHGSWDRRVGYNAPL-TAPA----DDPLSVKFSID 264
            :.|....|:..|.:.|:|:.|||:|:|.||.||||:...|.|:|| |.|:    :..|:|.:.::
 Frog   184 VAAGISNIESGYQIPQLSQALDYIHVMTYDLHGSWEGYTGENSPLYTNPSATGYNAYLNVDYVMN 248

  Fly   265 YLLKLGAPPEKLVMGLPFYGRTFKTLASGFLNDV---SEGVGFKGPYTREDGFLGYNEICQTLSN 326
            |.|..|||..||::|.|.||.|| .|::...|.:   :.|.|..|||||:.||..|.|||..|.|
 Frog   249 YWLNNGAPASKLIVGFPTYGHTF-ILSNPSNNGIGAPTSGNGPAGPYTRQAGFWAYYEICTFLKN 312

  Fly   327 -QTSGWTREWDP----QTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSV 386
             .|:.|:...|.    |.|:.|.               ||:.:|...|..:.|...|.|.|||::
 Frog   313 GATNLWSSAEDVPYAYQGSEWLG---------------YDNEKSFQIKAEWLMKNNLGGAMVWAI 362

  Fly   387 DTDDFLGN-CKLDEDTYEDFQKVTAAPKRSSQNYPLLRTINEATMLAVDEL-----AVPEPQPDD 445
            |.|||.|. |                   :...:||:.|:...  |.|...     |.|......
 Frog   363 DLDDFTGTFC-------------------NQGKFPLINTLKNT--LGVQASGCTPPATPVAPVTA 406

  Fly   446 SENEIPHGSIADRKNAGAS 464
            :...:|.||.:....:|:|
 Frog   407 APATVPSGSGSGSSGSGSS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_477298.2 GH18_chitolectin_chitotriosidase 43..428 CDD:119351 145/405 (36%)
chiaNP_001186489.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 145/408 (36%)
CBM_14 436..482 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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