DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and chia.1

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio


Alignment Length:452 Identity:141/452 - (31%)
Similarity:208/452 - (46%) Gaps:84/452 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLLLASTASSLWASVAARTGPLHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAGLD 81
            |.:||.....|...:.:.|      .:|||::.|:.|||..|.:..||.||.||||||||.|.:.
Zfish     4 LTILAGLGILLSLQIVSST------KLVCYMTNWSQYRPGNGKFLPENIDPFLCTHVVYALATIS 62

  Fly    82 ITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLRGR 146
            ... .|.::: |.|:..      |:.|..||:.:|.||..|::||...|.:.|..:||....|..
Zfish    63 YDN-QITTIE-WNDVDL------YKSMNELKKVNPALKTQLSVGGLVNGVSPYINMVATPENRKA 119

  Fly   147 FVKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADRENFVLLTKELREEFDEHG-------LLLTSA 204
            |::....|:|.:.|||:|:||:||......|.|::......||:|:..::..       |||:..
Zfish   120 FIRNALLFLRLHEFDGMDIDWQYPGHNGSPPQDKQRLTTFIKEMRDAIEQEAIDTKKTPLLLSIK 184

  Fly   205 IGASKKVIDEAYDVRQISRYLDYLHIMCYDYHGSWDRRVGYNAPLTAPADDPLS-----VKFSID 264
            :.|.|..|:.||:.::::..:|::.||.|||||.||...|:|:||...:.|..|     :..|::
Zfish   185 VSAIKTTIENAYEAKEVASLVDFVTIMSYDYHGHWDPITGHNSPLFRSSFDTGSIVHHNINSSLE 249

  Fly   265 YLLKLGAPPEKLVMGLPFYGRTF--KTLASGFLNDVSEGVGFKGPYTREDGFLGYNEICQTLSNQ 327
            :.|..|||.::|::|||.|||||  .|..:| |...:.|....||||||.||..|.|||...|:.
Zfish   250 FWLGSGAPADRLLLGLPTYGRTFMLSTSQTG-LGAPANGPADAGPYTREAGFWSYYEICPMESSV 313

  Fly   328 TSGWT-----------REWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGV 381
            ...|.           |.|                      |.:|:..||..||.:..|.:|.|.
Zfish   314 PIHWIDEQMVPYAVQGRAW----------------------VGFDNQESITAKVQWLNSLKLGGA 356

  Fly   382 MVWSVDTDDFLGNCKLDEDTYEDFQKVTAAPKRSSQN--YPLLRTINEATMLAVDELAVPEP 441
            .||::|.|||.|                    |...|  |||:..:..:..........|.|
Zfish   357 SVWTLDFDDFAG--------------------RFCYNGAYPLVNHLRNSLGFPPKPTTTPRP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 125/371 (34%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 134/411 (33%)
chia.1NP_998215.1 Glyco_18 23..364 CDD:214753 125/371 (34%)
GH18_chitolectin_chitotriosidase 24..386 CDD:119351 134/412 (33%)
ChtBD2 407..455 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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