DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and Chit1

DIOPT Version :10

Sequence 1:NP_477298.2 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:454 Identity:155/454 - (34%)
Similarity:228/454 - (50%) Gaps:80/454 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LLLASTASSL---WASVAARTGPLHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAG 79
            |.||...:.|   |.|.|.         :.||.:.||.||.....:...:.||||||||:|||||
  Rat     5 LALAGVTTLLMIQWGSAAK---------LFCYFTNWAQYRSGAARFLPRDVDPNLCTHVIYAFAG 60

  Fly    80 LDITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLLR 144
            |:..|  :.:::|..:|       .|:::..||:.:|.||..||:|||:.|:..::.:||....|
  Rat    61 LNNHQ--VSTVEPNDEL-------FYQELNSLKKRNPKLKTLLAVGGWSFGTQKFTDMVATASTR 116

  Fly   145 GRFVKQVSSFIRKYNFDGLDLDWEYPTQRKGKPA-DRENFVLLTKELREEFDEHG-------LLL 201
            ..||....||:|.:.|||||||||||..| |.|| |:|.|..|.::|.:.|.|..       |||
  Rat   117 QTFVNSALSFLRTHGFDGLDLDWEYPGSR-GSPAVDKERFTALIQDLAKAFQEEARASGKSRLLL 180

  Fly   202 TSAIGASKKVIDEAYDVRQISRYLDYLHIMCYDYHGSWDRRVGYNAPL-----TAPADDPLSVKF 261
            |:|:...:..:|..|:|.:|.:.||::::|.||:|.|||:..|:|:||     ....|...:|..
  Rat   181 TAAVPTGRGHVDAGYEVDKIVQSLDFINLMAYDFHSSWDKTTGHNSPLYKRQGETGKDAEKNVDA 245

  Fly   262 SIDYLLKLGAPPEKLVMGLPFYGRTFKTLASGFLNDV---SEGVGFKGPYTREDGFLGYNEICQT 323
            ::...|:.|.|..||::|:|.|||:| ||||...:.|   :.|.|..||||:|.|.|.|.|:|  
  Rat   246 AVTLWLQKGTPASKLMLGMPAYGRSF-TLASSSDSGVGAPATGPGAPGPYTKEKGILVYFEVC-- 307

  Fly   324 LSNQTSGWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDT 388
                  .|..:...:..:|...|:.|.:      |.:|...|...|..:...|.|.|.|||.:|.
  Rat   308 ------SWKGKQRIEDQKVPYVSQGNQW------VGFDDRESFRAKAAYVKQKGLGGAMVWILDG 360

  Fly   389 DDFLGN-CKLDEDTYEDFQKVTAAPKRSSQNYPLLRTINEATMLAVDELAVPEPQPDDSENEIP 451
            |||.|: |                   :...|||:||:::       ||::....|...|.|:|
  Rat   361 DDFKGSFC-------------------NEGQYPLIRTLHQ-------ELSLSSGPPRSPEQEVP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_477298.2 GH18_chitolectin_chitotriosidase 43..428 CDD:119351 142/401 (35%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 142/409 (35%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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