DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and cht-4

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:429 Identity:102/429 - (23%)
Similarity:173/429 - (40%) Gaps:98/429 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLLLLASTASSLWASVAARTGPLHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAGL 80
            |||:|                |:|...|.||   :.:.:|:     |.....|||||::...:..
 Worm     9 LLLIL----------------PVHTVPVACY---YILNQPD-----ISKVPKNLCTHIILINSAH 49

  Fly    81 DITQAAIKSLDPWQDLK--EEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEGSANYSTLVANNLL 143
            ......::..:  |||:  .|...|..|....:..|:|                ::|.|.:|..|
 Worm    50 VSEDGRLQGFE--QDLEHFSELFDGKIELFVSITSSNP----------------SFSFLTSNTTL 96

  Fly   144 RGRFVKQVSSFIRKYNFDGLDLDWEYPT-QRKGKPADRENFVLLTKELREEFDEHGLLLTSAIGA 207
            ...|...|:..::||..:|:|:|||:|. .|..:.:|:.:|....:.|:.......|.|:.|:..
 Worm    97 MHNFSSTVTQVLQKYRLNGVDIDWEFPVWSRDAQKSDKAHFATFLRILKSHLKPADLKLSVAVSG 161

  Fly   208 SKKVIDEAYDVRQISRYLDYLHIMCYDYHGSWDRR----VGYNAPLTAPADDPLSVKFSI----- 263
            ...:..:||||..:..|.|.:.||.||:| .::|.    ||:||||     .|:..:.|:     
 Worm   162 PPTISRKAYDVDALKMYADMVQIMNYDFH-VFNRYSNPFVGFNAPL-----HPMRAEISVLGEMN 220

  Fly   264 -DYLLK----LGAPPEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGPYTREDGFLGYNEICQT 323
             :..:|    ||.|......|:|.|.|.|:.|........|..:..:...|      ...::|  
 Worm   221 AEASMKTWYDLGLPRNISFFGIPTYARAFQLLTHYLHKPYSPAIRARPEIT------NLPDVC-- 277

  Fly   324 LSNQTSGWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDT 388
            :..|:..:|..|:..........:..::      |:|::.:||..|:.||...::.||||:|:.:
 Worm   278 IFAQSGYYTTVWNHHAQAPYLYGDDGIW------VSYENQQSILAKMAFARKLQVGGVMVFSIGS 336

  Fly   389 DDFLGNCKLDEDTYEDFQKVTAAPKRSSQNYPLLRTINE 427
            ||..|.|                   ....||||..|::
 Worm   337 DDVTGKC-------------------GHGPYPLLTKISK 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 87/363 (24%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 96/402 (24%)
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 92/389 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D826687at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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