DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht2 and chil-12

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_506770.2 Gene:chil-12 / 187357 WormBaseID:WBGene00010799 Length:450 Species:Caenorhabditis elegans


Alignment Length:428 Identity:92/428 - (21%)
Similarity:160/428 - (37%) Gaps:127/428 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLASTASSLWASVAARTGPLHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAGLDIT 83
            |.:..|||::.|...:..|:..:...|.......|.....:....|....| ||.::||..|...
 Worm    65 LSSPDASSIYNSFKNKFPPIKTEENTCSKRIIGYYSGTSDSEITINQVSKL-THAIFAFVQLTFD 128

  Fly    84 QAAIKSLDPWQDLKEEYGKGGYEKMTGL-KRSHPHLKVSLAIGGWNEGSANYSTLVANNLLRGRF 147
            ...:..           .|..:..:..: |..:..:|...:|||... |.|:|.:|.|...:.||
 Worm   129 GTLVFR-----------NKNRFMALRNIAKTENSTVKFMFSIGGPGH-SQNFSPVVRNQEKKRRF 181

  Fly   148 VKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADR---ENFVLLTKEL---REEFDEHGLLLTSAIG 206
            :|.:.||:.::..||:|:.|::|     ..||:   ..|:|...|:   |:::....|:....||
 Worm   182 IKSIFSFLEEHKLDGVDIFWKWP-----HLADKHAYSQFLLELNEILKTRKDYILSILVPPQGIG 241

  Fly   207 ASKKVIDEAYDVRQISRYLDYLHIMCYDYHGSW------------------DRRVGYNAPLTA-- 251
            .:     ..:.:.:|...:|:::|...||:|.|                  :||..:|...||  
 Worm   242 FA-----SGFKMNEIVENVDFINIFAMDYYGPWASGWGNPTGPISPIYGGSERREQWNVDNTAAI 301

  Fly   252 -PADDPLSVKFSIDYLLKLGAPPEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGP-----YTR 310
             ..:...|.||:|               .:||:.|.:        |:|.:.:.|.|.     .|.
 Worm   302 YSCETMRSSKFNI---------------VIPFFARLW--------NNVGKPIDFPGKEVYRNVTL 343

  Fly   311 EDGFL--------------GYN-------EICQT--LSNQTSGWTREWDPQTSQVLAKSERNVFT 352
            .||..              |||       ::.:|  :.|.|   |:|:                 
 Worm   344 IDGKAVGEVYMPRRSALQKGYNLSSYNYDDLSETAFIYNST---TKEY----------------- 388

  Fly   353 QEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDTDD 390
                 :|::..||||.|:.:..:..|.||.:|.:|.||
 Worm   389 -----LTFEVKRSIAAKLDYVQNMNLGGVWIWQMDMDD 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 84/402 (21%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 86/404 (21%)
chil-12NP_506770.2 Glyco_18 94..420 CDD:214753 83/396 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D369121at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.