DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and chil-6

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_496126.1 Gene:chil-6 / 182436 WormBaseID:WBGene00007471 Length:460 Species:Caenorhabditis elegans


Alignment Length:386 Identity:87/386 - (22%)
Similarity:159/386 - (41%) Gaps:86/386 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LCTHVVYAFA---GLDITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEG 130
            :.||::|.||   ...:|.....|...:..:|.|..|   |..|        |||.::||| ...
 Worm   133 MLTHIIYLFAIPKNGSLTFRDESSRRKFVAMKNEARK---ESST--------LKVMISIGG-QYS 185

  Fly   131 SANYSTLVANNLLRGRFVKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADRENFVLLTKELREEFD 195
            |..:|.||:....|..|...:.||::.|:.||:|:.|.:|     |.:|..|:::..:|||..|.
 Worm   186 SGEFSGLVSKETSRNLFTNSIVSFVQNYDIDGVDIFWTWP-----KYSDENNYLMFIRELRYAFT 245

  Fly   196 E--------HGLLLTSAIGASKKVIDEAYDVRQISRYLDYLHIMCYDYHGSWDRRVGYNAPL--- 249
            |        ...:::..|..:   ::...::.:.|.::|:|:|..::   |:..::|.::||   
 Worm   246 ELQKKLNRKETFVISLVISRN---VNHLSNLVEFSNFVDFLNIYLFN---SFLNQIGPDSPLYGG 304

  Fly   250 -TAPADDPLSVKFSIDYLLKLGAPPEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGPYTREDG 313
             :...|:  ::|:   |:.|.| .|.|..:.:.|:. |:...|...|.|.|:.:.......|...
 Worm   305 GSRIVDE--NMKY---YICKSG-QPSKFNIIVSFHA-TYWNGAELPLRDDSDDIWKDNNSGRLPI 362

  Fly   314 FLGYNEICQTLSNQTS----GWTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAM 374
            .|...::.|...|.|.    ..|:     ||.:........|      :|.:..||:..|..:..
 Worm   363 ALPRRQLRQYNWNLTDIKFHNLTK-----TSYIWIPGPPTRF------MTLEEERSLREKNRYVA 416

  Fly   375 SKRLAGVMVWSVDTDDFLGNCKLDEDTYEDFQKVTAAPKRSSQNYPLLRTINEATMLAVDE 435
            ...:.|:.:|::|.||       |:.|                   ||:.::.|.:...||
 Worm   417 DHNIGGITMWTIDQDD-------DDHT-------------------LLKVVSSAELCTGDE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 78/338 (23%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 84/377 (22%)
chil-6NP_496126.1 Glyco_18 113..431 CDD:214753 78/338 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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