DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht2 and chil-4

DIOPT Version :9

Sequence 1:NP_001246550.1 Gene:Cht2 / 38223 FlyBaseID:FBgn0022702 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_496125.1 Gene:chil-4 / 182434 WormBaseID:WBGene00007469 Length:457 Species:Caenorhabditis elegans


Alignment Length:380 Identity:87/380 - (22%)
Similarity:164/380 - (43%) Gaps:75/380 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LCTHVVYAFA---GLDITQAAIKSLDPWQDLKEEYGKGGYEKMTGLKRSHPHLKVSLAIGGWNEG 130
            :.||::|.||   ..::|....:|...::::|.|           .::::..|||.::||| ...
 Worm   131 MLTHIIYLFAIPKNGNMTFGGERSRRKFEEMKNE-----------ARKANSTLKVMISIGG-QSN 183

  Fly   131 SANYSTLVANNLLRGRFVKQVSSFIRKYNFDGLDLDWEYPTQRKGKPADRENFVLLTKELREEFD 195
            |.::|.||:|...|..||..:.||::||:.||:::.|.:|     |..|..|:::..:|||..|.
 Worm   184 SRSFSRLVSNETSRNVFVNSIVSFVQKYDIDGIEIFWTWP-----KYEDANNYLIFIQELRYAFI 243

  Fly   196 EHGLLLTSAIGASKKVIDEAYD-----VRQISRYLDYLHIMCYDYHGSWDRRVGYNAPLTAPADD 255
            |....|.........:|...||     :...|:::|:.:|....|.   .|:||.::||......
 Worm   244 ELQKKLNRKEDYVISIIVNCYDNQLSNLMGFSKFVDFFNIYSIHYQ---SRQVGPSSPLYGGGSR 305

  Fly   256 PL--SVKFSIDYLLKLGAPPEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGPYTREDGF-LGY 317
            .:  ::|:   |:.:.| .|.|..|.:.|:|..:|.......|| |:.: ||...:.:.|| :.:
 Worm   306 NIDETMKY---YICRTG-QPSKFNMMVLFHGTFWKGAELPLRND-SDDI-FKDQNSAKGGFAVRW 364

  Fly   318 NEICQTLSNQTSGWTREWDPQTSQV--LAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAG 380
            .|:.|          ::||....:.  |.|:...........:|.:..:|:..|..:.....:.|
 Worm   365 RELLQ----------QKWDMSNIKFHNLTKTSYMWIPGSSLFLTLEDEQSLRVKNRYVADHNIGG 419

  Fly   381 VMVWSVDTDDFLGNCKLDEDTYEDFQKVTAAPKRSSQNYPLLRTINEATMLAVDE 435
            :.:|::|.||                          .::.||:.::.|.:...||
 Worm   420 ITMWTIDQDD--------------------------GDHTLLKVVSSAELCTGDE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht2NP_001246550.1 Glyco_18 42..389 CDD:214753 80/332 (24%)
GH18_chitolectin_chitotriosidase 43..428 CDD:119351 84/371 (23%)
chil-4NP_496125.1 Glyco_18 111..428 CDD:214753 80/332 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 1 1.010 - - D369121at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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